Gene : Thecc1EG002442 T. cacao v1.1
Defline:  (1 of 1) PTHR24096//PTHR24096:SF219 - FAMILY NOT NAMED // LONG CHAIN ACYL-COA SYNTHETASE 8 Genomic Order:  1923
Name:  ? Thecc1EG002442 Secondary Identifier:  ? PAC:27435579
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-321 Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5143 Theobroma cacao pathologic  
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5885 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY66-389 Theobroma cacao pathologic  
Tcacao PWY-6733 Theobroma cacao pathologic  
Tcacao PWY-6803 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002442 0.5kb upstream 0.5kb upstream 8054 true scaffold_1: 13934611-13942664 Theobroma cacao
Thecc1EG002442 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13942165-13942664 Theobroma cacao
Thecc1EG002442 0.5kb downstream 0.5kb downstream 8054 true scaffold_1: 13934111-13942164 Theobroma cacao
Thecc1EG002442 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13934111-13934610 Theobroma cacao
Thecc1EG002442 1.0kb upstream 1.0kb upstream 8554 true scaffold_1: 13934611-13943164 Theobroma cacao
Thecc1EG002442 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13942165-13943164 Theobroma cacao
Thecc1EG002442 1.0kb downstream 1.0kb downstream 8554 true scaffold_1: 13933611-13942164 Theobroma cacao
Thecc1EG002442 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13933611-13934610 Theobroma cacao
Thecc1EG002442 2.0kb upstream 2.0kb upstream 9554 true scaffold_1: 13934611-13944164 Theobroma cacao
Thecc1EG002442 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13942165-13944164 Theobroma cacao
Thecc1EG002442 2.0kb downstream 2.0kb downstream 9554 true scaffold_1: 13932611-13942164 Theobroma cacao
Thecc1EG002442 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13932611-13934610 Theobroma cacao
Thecc1EG002442 5.0kb upstream 5.0kb upstream 12554 true scaffold_1: 13934611-13947164 Theobroma cacao
Thecc1EG002442 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13942165-13947164 Theobroma cacao
Thecc1EG002442 5.0kb downstream 5.0kb downstream 12554 true scaffold_1: 13929611-13942164 Theobroma cacao
Thecc1EG002442 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13929611-13934610 Theobroma cacao
Thecc1EG002442 10.0kb upstream 10.0kb upstream 17554 true scaffold_1: 13934611-13952164 Theobroma cacao
Thecc1EG002442 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13942165-13952164 Theobroma cacao
Thecc1EG002442 10.0kb downstream 10.0kb downstream 17554 true scaffold_1: 13924611-13942164 Theobroma cacao
Thecc1EG002442 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13924611-13934610 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830994 5264 Brassicales-Malvales View MSA
124343221 5266 SBM View MSA
124243031 5268 Malvidae View MSA
124066498 5270 Rosid View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain