Gene : Thecc1EG001677 T. cacao v1.1

Defline:  (1 of 1) PTHR24349//PTHR24349:SF166 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  1433
Name:  ? Thecc1EG001677 Secondary Identifier:  ? PAC:27436852

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001677 0.5kb upstream 0.5kb upstream 8946 true scaffold_1: 8675974-8684919 Theobroma cacao
Thecc1EG001677 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8684420-8684919 Theobroma cacao
Thecc1EG001677 0.5kb downstream 0.5kb downstream 8946 true scaffold_1: 8675474-8684419 Theobroma cacao
Thecc1EG001677 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8675474-8675973 Theobroma cacao
Thecc1EG001677 1.0kb upstream 1.0kb upstream 9446 true scaffold_1: 8675974-8685419 Theobroma cacao
Thecc1EG001677 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8684420-8685419 Theobroma cacao
Thecc1EG001677 1.0kb downstream 1.0kb downstream 9446 true scaffold_1: 8674974-8684419 Theobroma cacao
Thecc1EG001677 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8674974-8675973 Theobroma cacao
Thecc1EG001677 2.0kb upstream 2.0kb upstream 10446 true scaffold_1: 8675974-8686419 Theobroma cacao
Thecc1EG001677 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8684420-8686419 Theobroma cacao
Thecc1EG001677 2.0kb downstream 2.0kb downstream 10446 true scaffold_1: 8673974-8684419 Theobroma cacao
Thecc1EG001677 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8673974-8675973 Theobroma cacao
Thecc1EG001677 5.0kb upstream 5.0kb upstream 13446 true scaffold_1: 8675974-8689419 Theobroma cacao
Thecc1EG001677 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8684420-8689419 Theobroma cacao
Thecc1EG001677 5.0kb downstream 5.0kb downstream 13446 true scaffold_1: 8670974-8684419 Theobroma cacao
Thecc1EG001677 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8670974-8675973 Theobroma cacao
Thecc1EG001677 10.0kb upstream 10.0kb upstream 18446 true scaffold_1: 8675974-8694419 Theobroma cacao
Thecc1EG001677 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8684420-8694419 Theobroma cacao
Thecc1EG001677 10.0kb downstream 10.0kb downstream 18446 true scaffold_1: 8665974-8684419 Theobroma cacao
Thecc1EG001677 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8665974-8675973 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841198 5264 Brassicales-Malvales View MSA
124340869 5266 SBM View MSA
124252958 5268 Malvidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain