Gene : Thecc1EG001741 T. cacao v1.1
Defline:  (1 of 1) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1487
Name:  ? Thecc1EG001741 Secondary Identifier:  ? PAC:27432241
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ASPARTATE-DEG1-PWY Theobroma cacao pathologic  
Tcacao ASPARTATESYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  
Tcacao THRESYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001741 0.5kb upstream 0.5kb upstream 6224 true scaffold_1: 9141363-9147586 Theobroma cacao
Thecc1EG001741 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9147087-9147586 Theobroma cacao
Thecc1EG001741 0.5kb downstream 0.5kb downstream 6224 true scaffold_1: 9140863-9147086 Theobroma cacao
Thecc1EG001741 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9140863-9141362 Theobroma cacao
Thecc1EG001741 1.0kb upstream 1.0kb upstream 6724 true scaffold_1: 9141363-9148086 Theobroma cacao
Thecc1EG001741 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9147087-9148086 Theobroma cacao
Thecc1EG001741 1.0kb downstream 1.0kb downstream 6724 true scaffold_1: 9140363-9147086 Theobroma cacao
Thecc1EG001741 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9140363-9141362 Theobroma cacao
Thecc1EG001741 2.0kb upstream 2.0kb upstream 7724 true scaffold_1: 9141363-9149086 Theobroma cacao
Thecc1EG001741 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9147087-9149086 Theobroma cacao
Thecc1EG001741 2.0kb downstream 2.0kb downstream 7724 true scaffold_1: 9139363-9147086 Theobroma cacao
Thecc1EG001741 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9139363-9141362 Theobroma cacao
Thecc1EG001741 5.0kb upstream 5.0kb upstream 10724 true scaffold_1: 9141363-9152086 Theobroma cacao
Thecc1EG001741 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9147087-9152086 Theobroma cacao
Thecc1EG001741 5.0kb downstream 5.0kb downstream 10724 true scaffold_1: 9136363-9147086 Theobroma cacao
Thecc1EG001741 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9136363-9141362 Theobroma cacao
Thecc1EG001741 10.0kb upstream 10.0kb upstream 15724 true scaffold_1: 9141363-9157086 Theobroma cacao
Thecc1EG001741 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9147087-9157086 Theobroma cacao
Thecc1EG001741 10.0kb downstream 10.0kb downstream 15724 true scaffold_1: 9131363-9147086 Theobroma cacao
Thecc1EG001741 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9131363-9141362 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839385 5264 Brassicales-Malvales View MSA
124344803 5266 SBM View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain