Gene : Potri.018G022200 P. trichocarpa v3.1
Defline:  (1 of 2) K00811 - aspartate aminotransferase, chloroplastic (ASP5) Genomic Order:  229
Name:  ? Potri.018G022200 Secondary Identifier:  ? PAC:37247818
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ASPARTATE-DEG1-PWY Populus trichocarpa pathologic  
Ptrichocarpa ASPARTATESYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7117 Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G022200 0.5kb upstream 0.5kb upstream 5560 true Chr18: 1761817-1767376 Populus trichocarpa
Potri.018G022200 0.5kb upstream 0.5kb upstream 500 false Chr18: 1761817-1762316 Populus trichocarpa
Potri.018G022200 0.5kb downstream 0.5kb downstream 5560 true Chr18: 1762317-1767876 Populus trichocarpa
Potri.018G022200 0.5kb downstream 0.5kb downstream 500 false Chr18: 1767377-1767876 Populus trichocarpa
Potri.018G022200 1.0kb upstream 1.0kb upstream 6060 true Chr18: 1761317-1767376 Populus trichocarpa
Potri.018G022200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1761317-1762316 Populus trichocarpa
Potri.018G022200 1.0kb downstream 1.0kb downstream 6060 true Chr18: 1762317-1768376 Populus trichocarpa
Potri.018G022200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1767377-1768376 Populus trichocarpa
Potri.018G022200 2.0kb upstream 2.0kb upstream 7060 true Chr18: 1760317-1767376 Populus trichocarpa
Potri.018G022200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1760317-1762316 Populus trichocarpa
Potri.018G022200 2.0kb downstream 2.0kb downstream 7060 true Chr18: 1762317-1769376 Populus trichocarpa
Potri.018G022200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1767377-1769376 Populus trichocarpa
Potri.018G022200 5.0kb upstream 5.0kb upstream 10060 true Chr18: 1757317-1767376 Populus trichocarpa
Potri.018G022200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1757317-1762316 Populus trichocarpa
Potri.018G022200 5.0kb downstream 5.0kb downstream 10060 true Chr18: 1762317-1772376 Populus trichocarpa
Potri.018G022200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1767377-1772376 Populus trichocarpa
Potri.018G022200 10.0kb upstream 10.0kb upstream 15060 true Chr18: 1752317-1767376 Populus trichocarpa
Potri.018G022200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1752317-1762316 Populus trichocarpa
Potri.018G022200 10.0kb downstream 10.0kb downstream 15060 true Chr18: 1762317-1777376 Populus trichocarpa
Potri.018G022200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1767377-1777376 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457311 5262 Malpighiales View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain