Gene : Potri.015G089300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR12741//PTHR12741:SF5 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // CALLOSE SYNTHASE 10 Genomic Order:  917
Name:  ? Potri.015G089300 Secondary Identifier:  ? PAC:37253622

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6773 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G089300 0.5kb upstream 0.5kb upstream 31133 true Chr15: 11164420-11195552 Populus trichocarpa
Potri.015G089300 0.5kb upstream 0.5kb upstream 500 false Chr15: 11195053-11195552 Populus trichocarpa
Potri.015G089300 0.5kb downstream 0.5kb downstream 31133 true Chr15: 11163920-11195052 Populus trichocarpa
Potri.015G089300 0.5kb downstream 0.5kb downstream 500 false Chr15: 11163920-11164419 Populus trichocarpa
Potri.015G089300 1.0kb upstream 1.0kb upstream 31633 true Chr15: 11164420-11196052 Populus trichocarpa
Potri.015G089300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11195053-11196052 Populus trichocarpa
Potri.015G089300 1.0kb downstream 1.0kb downstream 31633 true Chr15: 11163420-11195052 Populus trichocarpa
Potri.015G089300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11163420-11164419 Populus trichocarpa
Potri.015G089300 2.0kb upstream 2.0kb upstream 32633 true Chr15: 11164420-11197052 Populus trichocarpa
Potri.015G089300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11195053-11197052 Populus trichocarpa
Potri.015G089300 2.0kb downstream 2.0kb downstream 32633 true Chr15: 11162420-11195052 Populus trichocarpa
Potri.015G089300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11162420-11164419 Populus trichocarpa
Potri.015G089300 5.0kb upstream 5.0kb upstream 35633 true Chr15: 11164420-11200052 Populus trichocarpa
Potri.015G089300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11195053-11200052 Populus trichocarpa
Potri.015G089300 5.0kb downstream 5.0kb downstream 35633 true Chr15: 11159420-11195052 Populus trichocarpa
Potri.015G089300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11159420-11164419 Populus trichocarpa
Potri.015G089300 10.0kb upstream 10.0kb upstream 40633 true Chr15: 11164420-11205052 Populus trichocarpa
Potri.015G089300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11195053-11205052 Populus trichocarpa
Potri.015G089300 10.0kb downstream 10.0kb downstream 40633 true Chr15: 11154420-11195052 Populus trichocarpa
Potri.015G089300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11154420-11164419 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460204 5262 Malpighiales View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain