Gene : Potri.014G169400 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR24096:SF219 - LONG CHAIN ACYL-COA SYNTHETASE 8 Genomic Order:  1755
Name:  ? Potri.014G169400 Secondary Identifier:  ? PAC:37267437

Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1121 Populus trichocarpa pathologic  
Ptrichocarpa PWY-321 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5136 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5143 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5147 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5885 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5971 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5989 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-389 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6733 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6803 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G169400 0.5kb upstream 0.5kb upstream 6134   true Chr14: 13555207-13561340 Populus trichocarpa
Potri.014G169400 0.5kb upstream 0.5kb upstream 500   false Chr14: 13560841-13561340 Populus trichocarpa
Potri.014G169400 0.5kb downstream 0.5kb downstream 6134   true Chr14: 13554707-13560840 Populus trichocarpa
Potri.014G169400 0.5kb downstream 0.5kb downstream 500   false Chr14: 13554707-13555206 Populus trichocarpa
Potri.014G169400 1.0kb upstream 1.0kb upstream 6634   true Chr14: 13555207-13561840 Populus trichocarpa
Potri.014G169400 1.0kb upstream 1.0kb upstream 1000   false Chr14: 13560841-13561840 Populus trichocarpa
Potri.014G169400 1.0kb downstream 1.0kb downstream 6634   true Chr14: 13554207-13560840 Populus trichocarpa
Potri.014G169400 1.0kb downstream 1.0kb downstream 1000   false Chr14: 13554207-13555206 Populus trichocarpa
Potri.014G169400 2.0kb upstream 2.0kb upstream 7634   true Chr14: 13555207-13562840 Populus trichocarpa
Potri.014G169400 2.0kb upstream 2.0kb upstream 2000   false Chr14: 13560841-13562840 Populus trichocarpa
Potri.014G169400 2.0kb downstream 2.0kb downstream 7634   true Chr14: 13553207-13560840 Populus trichocarpa
Potri.014G169400 2.0kb downstream 2.0kb downstream 2000   false Chr14: 13553207-13555206 Populus trichocarpa
Potri.014G169400 5.0kb upstream 5.0kb upstream 10634   true Chr14: 13555207-13565840 Populus trichocarpa
Potri.014G169400 5.0kb upstream 5.0kb upstream 5000   false Chr14: 13560841-13565840 Populus trichocarpa
Potri.014G169400 5.0kb downstream 5.0kb downstream 10634   true Chr14: 13550207-13560840 Populus trichocarpa
Potri.014G169400 5.0kb downstream 5.0kb downstream 5000   false Chr14: 13550207-13555206 Populus trichocarpa
Potri.014G169400 10.0kb upstream 10.0kb upstream 15634   true Chr14: 13555207-13570840 Populus trichocarpa
Potri.014G169400 10.0kb upstream 10.0kb upstream 10000   false Chr14: 13560841-13570840 Populus trichocarpa
Potri.014G169400 10.0kb downstream 10.0kb downstream 15634   true Chr14: 13545207-13560840 Populus trichocarpa
Potri.014G169400 10.0kb downstream 10.0kb downstream 10000   false Chr14: 13545207-13555206 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458789 5262 Malpighiales View MSA
124243031 5268 Malvidae View MSA
124066498 5270 Rosid View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain