Gene : Potri.004G177500 P. trichocarpa v3.1

Defline:  (1 of 2) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) Genomic Order:  1809
Name:  ? Potri.004G177500 Secondary Identifier:  ? PAC:37232041

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G177500 0.5kb upstream 0.5kb upstream 5931 true Chr04: 19553239-19559169 Populus trichocarpa
Potri.004G177500 0.5kb upstream 0.5kb upstream 500 false Chr04: 19553239-19553738 Populus trichocarpa
Potri.004G177500 0.5kb downstream 0.5kb downstream 5931 true Chr04: 19553739-19559669 Populus trichocarpa
Potri.004G177500 0.5kb downstream 0.5kb downstream 500 false Chr04: 19559170-19559669 Populus trichocarpa
Potri.004G177500 1.0kb upstream 1.0kb upstream 6431 true Chr04: 19552739-19559169 Populus trichocarpa
Potri.004G177500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19552739-19553738 Populus trichocarpa
Potri.004G177500 1.0kb downstream 1.0kb downstream 6431 true Chr04: 19553739-19560169 Populus trichocarpa
Potri.004G177500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19559170-19560169 Populus trichocarpa
Potri.004G177500 2.0kb upstream 2.0kb upstream 7431 true Chr04: 19551739-19559169 Populus trichocarpa
Potri.004G177500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19551739-19553738 Populus trichocarpa
Potri.004G177500 2.0kb downstream 2.0kb downstream 7431 true Chr04: 19553739-19561169 Populus trichocarpa
Potri.004G177500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19559170-19561169 Populus trichocarpa
Potri.004G177500 5.0kb upstream 5.0kb upstream 10431 true Chr04: 19548739-19559169 Populus trichocarpa
Potri.004G177500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19548739-19553738 Populus trichocarpa
Potri.004G177500 5.0kb downstream 5.0kb downstream 10431 true Chr04: 19553739-19564169 Populus trichocarpa
Potri.004G177500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19559170-19564169 Populus trichocarpa
Potri.004G177500 10.0kb upstream 10.0kb upstream 15431 true Chr04: 19543739-19559169 Populus trichocarpa
Potri.004G177500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19543739-19553738 Populus trichocarpa
Potri.004G177500 10.0kb downstream 10.0kb downstream 15431 true Chr04: 19553739-19569169 Populus trichocarpa
Potri.004G177500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19559170-19569169 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413868 5262 Malpighiales View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain