Gene : Phvul.009G151700 P. vulgaris v2.1
Defline:  (1 of 23) KOG1427 - Uncharacterized conserved protein, contains RCC1 domain Genomic Order:  1559
Name:  ? Phvul.009G151700 Secondary Identifier:  ? PAC:37151656
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G151700 0.5kb upstream 0.5kb upstream 15243 true Chr09: 22533228-22548470 Phaseolus vulgaris
Phvul.009G151700 0.5kb upstream 0.5kb upstream 500 false Chr09: 22533228-22533727 Phaseolus vulgaris
Phvul.009G151700 0.5kb downstream 0.5kb downstream 15243 true Chr09: 22533728-22548970 Phaseolus vulgaris
Phvul.009G151700 0.5kb downstream 0.5kb downstream 500 false Chr09: 22548471-22548970 Phaseolus vulgaris
Phvul.009G151700 1.0kb upstream 1.0kb upstream 15743 true Chr09: 22532728-22548470 Phaseolus vulgaris
Phvul.009G151700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22532728-22533727 Phaseolus vulgaris
Phvul.009G151700 1.0kb downstream 1.0kb downstream 15743 true Chr09: 22533728-22549470 Phaseolus vulgaris
Phvul.009G151700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22548471-22549470 Phaseolus vulgaris
Phvul.009G151700 2.0kb upstream 2.0kb upstream 16743 true Chr09: 22531728-22548470 Phaseolus vulgaris
Phvul.009G151700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22531728-22533727 Phaseolus vulgaris
Phvul.009G151700 2.0kb downstream 2.0kb downstream 16743 true Chr09: 22533728-22550470 Phaseolus vulgaris
Phvul.009G151700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22548471-22550470 Phaseolus vulgaris
Phvul.009G151700 5.0kb upstream 5.0kb upstream 19743 true Chr09: 22528728-22548470 Phaseolus vulgaris
Phvul.009G151700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22528728-22533727 Phaseolus vulgaris
Phvul.009G151700 5.0kb downstream 5.0kb downstream 19743 true Chr09: 22533728-22553470 Phaseolus vulgaris
Phvul.009G151700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22548471-22553470 Phaseolus vulgaris
Phvul.009G151700 10.0kb upstream 10.0kb upstream 24743 true Chr09: 22523728-22548470 Phaseolus vulgaris
Phvul.009G151700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22523728-22533727 Phaseolus vulgaris
Phvul.009G151700 10.0kb downstream 10.0kb downstream 24743 true Chr09: 22533728-22558470 Phaseolus vulgaris
Phvul.009G151700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22548471-22558470 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306032 5265 Fabidae View MSA
124067289 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15581 0.0 11.9622    
cufflinks 2.3567 0.0 9.60746    
cufflinks 4.18437 0.0 14.7184   High
cufflinks 3.65118 0.0 13.6945    
cufflinks 2.20402 0.0 9.32075    
cufflinks 3.89016 0.0 13.9095   High
cufflinks 2.46395 0.0 9.92093    
cufflinks 2.96689 0.0 11.2735    
cufflinks 1.84353 0.0 8.07686   Low
cufflinks 1.62411 0.0 7.32673   Low
cufflinks 3.19657 0.0 12.1565    

0 Strain