Gene : Phvul.006G070400 P. vulgaris v2.1
Defline:  (1 of 2) PF02151//PF13474 - UvrB/uvrC motif (UVR) // SnoaL-like domain (SnoaL_3) Genomic Order:  688
Name:  ? Phvul.006G070400 Secondary Identifier:  ? PAC:37173760
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G070400 0.5kb upstream 0.5kb upstream 2651 true Chr06: 18261644-18264294 Phaseolus vulgaris
Phvul.006G070400 0.5kb upstream 0.5kb upstream 500 false Chr06: 18261644-18262143 Phaseolus vulgaris
Phvul.006G070400 0.5kb downstream 0.5kb downstream 2651 true Chr06: 18262144-18264794 Phaseolus vulgaris
Phvul.006G070400 0.5kb downstream 0.5kb downstream 500 false Chr06: 18264295-18264794 Phaseolus vulgaris
Phvul.006G070400 1.0kb upstream 1.0kb upstream 3151 true Chr06: 18261144-18264294 Phaseolus vulgaris
Phvul.006G070400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18261144-18262143 Phaseolus vulgaris
Phvul.006G070400 1.0kb downstream 1.0kb downstream 3151 true Chr06: 18262144-18265294 Phaseolus vulgaris
Phvul.006G070400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18264295-18265294 Phaseolus vulgaris
Phvul.006G070400 2.0kb upstream 2.0kb upstream 4151 true Chr06: 18260144-18264294 Phaseolus vulgaris
Phvul.006G070400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18260144-18262143 Phaseolus vulgaris
Phvul.006G070400 2.0kb downstream 2.0kb downstream 4151 true Chr06: 18262144-18266294 Phaseolus vulgaris
Phvul.006G070400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18264295-18266294 Phaseolus vulgaris
Phvul.006G070400 5.0kb upstream 5.0kb upstream 7151 true Chr06: 18257144-18264294 Phaseolus vulgaris
Phvul.006G070400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18257144-18262143 Phaseolus vulgaris
Phvul.006G070400 5.0kb downstream 5.0kb downstream 7151 true Chr06: 18262144-18269294 Phaseolus vulgaris
Phvul.006G070400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18264295-18269294 Phaseolus vulgaris
Phvul.006G070400 10.0kb upstream 10.0kb upstream 12151 true Chr06: 18252144-18264294 Phaseolus vulgaris
Phvul.006G070400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18252144-18262143 Phaseolus vulgaris
Phvul.006G070400 10.0kb downstream 10.0kb downstream 12151 true Chr06: 18262144-18274294 Phaseolus vulgaris
Phvul.006G070400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18264295-18274294 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300001 5265 Fabidae View MSA
124061474 5270 Rosid View MSA
123738801 5271 Pentapetalae View MSA
122791549 5272 Eudicot View MSA
122042270 5273 Angiosperm View MSA
121344276 5274 Embryophyte View MSA
123425635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4156 0.0 44.6858   High
cufflinks 7.06192 0.0 24.3335    
cufflinks 9.20088 0.0 34.9862    
cufflinks 9.86187 0.0 32.3028    
cufflinks 7.38538 0.0 26.1931    
cufflinks 7.27451 0.0 24.8801    
cufflinks 4.7489 0.0 18.0229    
cufflinks 6.8738 0.0 23.5738    
cufflinks 2.5607 0.0 8.98753   Low
cufflinks 12.0209 0.0 43.9288   High
cufflinks 6.40914 0.0 23.3348    

0 Strain