Gene : Phvul.006G072400 P. vulgaris v2.1
Defline:  (1 of 3) K18270 - Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1) Genomic Order:  709
Name:  ? Phvul.006G072400 Secondary Identifier:  ? PAC:37171713
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G072400 0.5kb upstream 0.5kb upstream 14559 true Chr06: 18512416-18526974 Phaseolus vulgaris
Phvul.006G072400 0.5kb upstream 0.5kb upstream 500 false Chr06: 18512416-18512915 Phaseolus vulgaris
Phvul.006G072400 0.5kb downstream 0.5kb downstream 14559 true Chr06: 18512916-18527474 Phaseolus vulgaris
Phvul.006G072400 0.5kb downstream 0.5kb downstream 500 false Chr06: 18526975-18527474 Phaseolus vulgaris
Phvul.006G072400 1.0kb upstream 1.0kb upstream 15059 true Chr06: 18511916-18526974 Phaseolus vulgaris
Phvul.006G072400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18511916-18512915 Phaseolus vulgaris
Phvul.006G072400 1.0kb downstream 1.0kb downstream 15059 true Chr06: 18512916-18527974 Phaseolus vulgaris
Phvul.006G072400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18526975-18527974 Phaseolus vulgaris
Phvul.006G072400 2.0kb upstream 2.0kb upstream 16059 true Chr06: 18510916-18526974 Phaseolus vulgaris
Phvul.006G072400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18510916-18512915 Phaseolus vulgaris
Phvul.006G072400 2.0kb downstream 2.0kb downstream 16059 true Chr06: 18512916-18528974 Phaseolus vulgaris
Phvul.006G072400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18526975-18528974 Phaseolus vulgaris
Phvul.006G072400 5.0kb upstream 5.0kb upstream 19059 true Chr06: 18507916-18526974 Phaseolus vulgaris
Phvul.006G072400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18507916-18512915 Phaseolus vulgaris
Phvul.006G072400 5.0kb downstream 5.0kb downstream 19059 true Chr06: 18512916-18531974 Phaseolus vulgaris
Phvul.006G072400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18526975-18531974 Phaseolus vulgaris
Phvul.006G072400 10.0kb upstream 10.0kb upstream 24059 true Chr06: 18502916-18526974 Phaseolus vulgaris
Phvul.006G072400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18502916-18512915 Phaseolus vulgaris
Phvul.006G072400 10.0kb downstream 10.0kb downstream 24059 true Chr06: 18512916-18536974 Phaseolus vulgaris
Phvul.006G072400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18526975-18536974 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306876 5265 Fabidae View MSA
124066947 5270 Rosid View MSA
123736688 5271 Pentapetalae View MSA
122788269 5272 Eudicot View MSA
122044844 5273 Angiosperm View MSA
121347973 5274 Embryophyte View MSA
123424737 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73218 0.0 10.3982   Low
cufflinks 4.17201 0.0 11.5263   Low
cufflinks 7.77588 0.0 20.4261    
cufflinks 4.06966 0.0 11.358   Low
cufflinks 5.8528 0.0 15.7996    
cufflinks 7.07979 0.0 18.7387    
cufflinks 9.0936 0.0 23.7575   High
cufflinks 7.24451 0.0 19.1076    
cufflinks 9.66218 0.0 25.206   High
cufflinks 7.7758 0.0 20.4774    
cufflinks 5.43259 0.0 14.7412    

0 Strain