Gene : Phvul.007G193500 P. vulgaris v2.1
Defline:  (1 of 2) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9) Genomic Order:  1794
Name:  ? Phvul.007G193500 Secondary Identifier:  ? PAC:37165364
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G193500 0.5kb upstream 0.5kb upstream 8912 true Chr07: 31521555-31530466 Phaseolus vulgaris
Phvul.007G193500 0.5kb upstream 0.5kb upstream 500 false Chr07: 31521555-31522054 Phaseolus vulgaris
Phvul.007G193500 0.5kb downstream 0.5kb downstream 8912 true Chr07: 31522055-31530966 Phaseolus vulgaris
Phvul.007G193500 0.5kb downstream 0.5kb downstream 500 false Chr07: 31530467-31530966 Phaseolus vulgaris
Phvul.007G193500 1.0kb upstream 1.0kb upstream 9412 true Chr07: 31521055-31530466 Phaseolus vulgaris
Phvul.007G193500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31521055-31522054 Phaseolus vulgaris
Phvul.007G193500 1.0kb downstream 1.0kb downstream 9412 true Chr07: 31522055-31531466 Phaseolus vulgaris
Phvul.007G193500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31530467-31531466 Phaseolus vulgaris
Phvul.007G193500 2.0kb upstream 2.0kb upstream 10412 true Chr07: 31520055-31530466 Phaseolus vulgaris
Phvul.007G193500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31520055-31522054 Phaseolus vulgaris
Phvul.007G193500 2.0kb downstream 2.0kb downstream 10412 true Chr07: 31522055-31532466 Phaseolus vulgaris
Phvul.007G193500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31530467-31532466 Phaseolus vulgaris
Phvul.007G193500 5.0kb upstream 5.0kb upstream 13412 true Chr07: 31517055-31530466 Phaseolus vulgaris
Phvul.007G193500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31517055-31522054 Phaseolus vulgaris
Phvul.007G193500 5.0kb downstream 5.0kb downstream 13412 true Chr07: 31522055-31535466 Phaseolus vulgaris
Phvul.007G193500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31530467-31535466 Phaseolus vulgaris
Phvul.007G193500 10.0kb upstream 10.0kb upstream 18412 true Chr07: 31512055-31530466 Phaseolus vulgaris
Phvul.007G193500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31512055-31522054 Phaseolus vulgaris
Phvul.007G193500 10.0kb downstream 10.0kb downstream 18412 true Chr07: 31522055-31540466 Phaseolus vulgaris
Phvul.007G193500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31530467-31540466 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041039 5273 Angiosperm View MSA
122304520 5265 Fabidae View MSA
124050268 5270 Rosid View MSA
123750448 5271 Pentapetalae View MSA
122793335 5272 Eudicot View MSA
121343805 5274 Embryophyte View MSA
123424907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.35151 0.0 12.1771   Low
cufflinks 6.47218 0.0 20.4615    
cufflinks 3.89594 0.0 13.3689    
cufflinks 3.47049 0.0 13.4748   Low
cufflinks 4.9776 0.0 16.7508    
cufflinks 3.51272 0.0 14.7858   Low
cufflinks 5.58087 0.0 20.8563    
cufflinks 7.14728 0.0 25.3098   High
cufflinks 7.52801 0.0 26.6116   High
cufflinks 5.49445 0.0 17.8915    
cufflinks 5.09 0.0 17.0272    

0 Strain