Gene : Phvul.007G085000 P. vulgaris v2.1
Defline:  (1 of 2) PF07343 - Protein of unknown function (DUF1475) (DUF1475) Genomic Order:  858
Name:  ? Phvul.007G085000 Secondary Identifier:  ? PAC:37164999
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G085000 0.5kb upstream 0.5kb upstream 6097 true Chr07: 8590978-8597074 Phaseolus vulgaris
Phvul.007G085000 0.5kb upstream 0.5kb upstream 500 false Chr07: 8596575-8597074 Phaseolus vulgaris
Phvul.007G085000 0.5kb downstream 0.5kb downstream 6097 true Chr07: 8590478-8596574 Phaseolus vulgaris
Phvul.007G085000 0.5kb downstream 0.5kb downstream 500 false Chr07: 8590478-8590977 Phaseolus vulgaris
Phvul.007G085000 1.0kb upstream 1.0kb upstream 6597 true Chr07: 8590978-8597574 Phaseolus vulgaris
Phvul.007G085000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8596575-8597574 Phaseolus vulgaris
Phvul.007G085000 1.0kb downstream 1.0kb downstream 6597 true Chr07: 8589978-8596574 Phaseolus vulgaris
Phvul.007G085000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8589978-8590977 Phaseolus vulgaris
Phvul.007G085000 2.0kb upstream 2.0kb upstream 7597 true Chr07: 8590978-8598574 Phaseolus vulgaris
Phvul.007G085000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8596575-8598574 Phaseolus vulgaris
Phvul.007G085000 2.0kb downstream 2.0kb downstream 7597 true Chr07: 8588978-8596574 Phaseolus vulgaris
Phvul.007G085000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8588978-8590977 Phaseolus vulgaris
Phvul.007G085000 5.0kb upstream 5.0kb upstream 10597 true Chr07: 8590978-8601574 Phaseolus vulgaris
Phvul.007G085000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8596575-8601574 Phaseolus vulgaris
Phvul.007G085000 5.0kb downstream 5.0kb downstream 10597 true Chr07: 8585978-8596574 Phaseolus vulgaris
Phvul.007G085000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8585978-8590977 Phaseolus vulgaris
Phvul.007G085000 10.0kb upstream 10.0kb upstream 15597 true Chr07: 8590978-8606574 Phaseolus vulgaris
Phvul.007G085000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8596575-8606574 Phaseolus vulgaris
Phvul.007G085000 10.0kb downstream 10.0kb downstream 15597 true Chr07: 8580978-8596574 Phaseolus vulgaris
Phvul.007G085000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8580978-8590977 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026258 5273 Angiosperm View MSA
122307319 5265 Fabidae View MSA
124062970 5270 Rosid View MSA
123738369 5271 Pentapetalae View MSA
122787802 5272 Eudicot View MSA
121296248 5274 Embryophyte View MSA
123334445 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.684 0.0 13.6997    
cufflinks 7.52621 0.0 35.6351    
cufflinks 1.4712 0.0 11.3584    
cufflinks 2.33077 0.0 15.2056    
cufflinks 42.2002 0.0 156.488 High High
cufflinks 1.33142 0.0 5.73344    
cufflinks 2.10406 0.0 8.68517    
cufflinks 1.21784 0.0 5.40763    
cufflinks 1.06972 0.0 5.00351    
cufflinks 41.4712 0.0 150.988 High High
cufflinks 32.1056 0.0 123.485   High

0 Strain