Gene : Phvul.007G001500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  14
Name:  ? Phvul.007G001500 Secondary Identifier:  ? PAC:37167150
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G001500 0.5kb upstream 0.5kb upstream 4232 true Chr07: 78793-83024 Phaseolus vulgaris
Phvul.007G001500 0.5kb upstream 0.5kb upstream 500 false Chr07: 78793-79292 Phaseolus vulgaris
Phvul.007G001500 0.5kb downstream 0.5kb downstream 4232 true Chr07: 79293-83524 Phaseolus vulgaris
Phvul.007G001500 0.5kb downstream 0.5kb downstream 500 false Chr07: 83025-83524 Phaseolus vulgaris
Phvul.007G001500 1.0kb upstream 1.0kb upstream 4732 true Chr07: 78293-83024 Phaseolus vulgaris
Phvul.007G001500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 78293-79292 Phaseolus vulgaris
Phvul.007G001500 1.0kb downstream 1.0kb downstream 4732 true Chr07: 79293-84024 Phaseolus vulgaris
Phvul.007G001500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 83025-84024 Phaseolus vulgaris
Phvul.007G001500 2.0kb upstream 2.0kb upstream 5732 true Chr07: 77293-83024 Phaseolus vulgaris
Phvul.007G001500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 77293-79292 Phaseolus vulgaris
Phvul.007G001500 2.0kb downstream 2.0kb downstream 5732 true Chr07: 79293-85024 Phaseolus vulgaris
Phvul.007G001500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 83025-85024 Phaseolus vulgaris
Phvul.007G001500 5.0kb upstream 5.0kb upstream 8732 true Chr07: 74293-83024 Phaseolus vulgaris
Phvul.007G001500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 74293-79292 Phaseolus vulgaris
Phvul.007G001500 5.0kb downstream 5.0kb downstream 8732 true Chr07: 79293-88024 Phaseolus vulgaris
Phvul.007G001500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 83025-88024 Phaseolus vulgaris
Phvul.007G001500 10.0kb upstream 10.0kb upstream 13732 true Chr07: 69293-83024 Phaseolus vulgaris
Phvul.007G001500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 69293-79292 Phaseolus vulgaris
Phvul.007G001500 10.0kb downstream 10.0kb downstream 13732 true Chr07: 79293-93024 Phaseolus vulgaris
Phvul.007G001500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 83025-93024 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656291 5273 Angiosperm View MSA
122298031 5265 Fabidae View MSA
124036278 5270 Rosid View MSA
123609647 5271 Pentapetalae View MSA
122644291 5272 Eudicot View MSA
120928373 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148986 0.0 0.606222 Low Low
cufflinks 0.275591 0.0 1.34724 Low  
cufflinks 1.84874 0.0 6.46958   High
cufflinks 0.453572 0.0 2.13284 Low  
cufflinks 1.06459 0.0 5.52509    
cufflinks 1.49193 0.0 5.52115   High
cufflinks 0.731897 0.0 4.18828    
cufflinks 0.616032 0.0 3.66314    
cufflinks 0.468493 0.0 2.1651 Low  
cufflinks 0.134131 0.0 0.552107 Low Low
cufflinks 0.606873 0.0 3.64018    

0 Strain