Gene : Phvul.003G268100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33070:SF3 - EXPRESSED PROTEIN Genomic Order:  2728
Name:  ? Phvul.003G268100 Secondary Identifier:  ? PAC:37147247
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G268100 0.5kb upstream 0.5kb upstream 1415 true Chr03: 50605021-50606435 Phaseolus vulgaris
Phvul.003G268100 0.5kb upstream 0.5kb upstream 500 false Chr03: 50605021-50605520 Phaseolus vulgaris
Phvul.003G268100 0.5kb downstream 0.5kb downstream 1415 true Chr03: 50605521-50606935 Phaseolus vulgaris
Phvul.003G268100 0.5kb downstream 0.5kb downstream 500 false Chr03: 50606436-50606935 Phaseolus vulgaris
Phvul.003G268100 1.0kb upstream 1.0kb upstream 1915 true Chr03: 50604521-50606435 Phaseolus vulgaris
Phvul.003G268100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50604521-50605520 Phaseolus vulgaris
Phvul.003G268100 1.0kb downstream 1.0kb downstream 1915 true Chr03: 50605521-50607435 Phaseolus vulgaris
Phvul.003G268100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50606436-50607435 Phaseolus vulgaris
Phvul.003G268100 2.0kb upstream 2.0kb upstream 2915 true Chr03: 50603521-50606435 Phaseolus vulgaris
Phvul.003G268100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50603521-50605520 Phaseolus vulgaris
Phvul.003G268100 2.0kb downstream 2.0kb downstream 2915 true Chr03: 50605521-50608435 Phaseolus vulgaris
Phvul.003G268100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50606436-50608435 Phaseolus vulgaris
Phvul.003G268100 5.0kb upstream 5.0kb upstream 5915 true Chr03: 50600521-50606435 Phaseolus vulgaris
Phvul.003G268100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50600521-50605520 Phaseolus vulgaris
Phvul.003G268100 5.0kb downstream 5.0kb downstream 5915 true Chr03: 50605521-50611435 Phaseolus vulgaris
Phvul.003G268100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50606436-50611435 Phaseolus vulgaris
Phvul.003G268100 10.0kb upstream 10.0kb upstream 10915 true Chr03: 50595521-50606435 Phaseolus vulgaris
Phvul.003G268100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50595521-50605520 Phaseolus vulgaris
Phvul.003G268100 10.0kb downstream 10.0kb downstream 10915 true Chr03: 50605521-50616435 Phaseolus vulgaris
Phvul.003G268100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50606436-50616435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314618 5265 Fabidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0798668 0.0 0.370993 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0460926 0.0 0.22574 Low  
cufflinks 0.0339581 0.0 0.171938 Low  
cufflinks 0.197305 0.0 0.834309 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain