Gene : Phvul.003G234600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Genomic Order:  2381
Name:  ? Phvul.003G234600 Secondary Identifier:  ? PAC:37144436
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G234600 0.5kb upstream 0.5kb upstream 9050 true Chr03: 46804883-46813932 Phaseolus vulgaris
Phvul.003G234600 0.5kb upstream 0.5kb upstream 500 false Chr03: 46804883-46805382 Phaseolus vulgaris
Phvul.003G234600 0.5kb downstream 0.5kb downstream 9050 true Chr03: 46805383-46814432 Phaseolus vulgaris
Phvul.003G234600 0.5kb downstream 0.5kb downstream 500 false Chr03: 46813933-46814432 Phaseolus vulgaris
Phvul.003G234600 1.0kb upstream 1.0kb upstream 9550 true Chr03: 46804383-46813932 Phaseolus vulgaris
Phvul.003G234600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46804383-46805382 Phaseolus vulgaris
Phvul.003G234600 1.0kb downstream 1.0kb downstream 9550 true Chr03: 46805383-46814932 Phaseolus vulgaris
Phvul.003G234600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46813933-46814932 Phaseolus vulgaris
Phvul.003G234600 2.0kb upstream 2.0kb upstream 10550 true Chr03: 46803383-46813932 Phaseolus vulgaris
Phvul.003G234600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46803383-46805382 Phaseolus vulgaris
Phvul.003G234600 2.0kb downstream 2.0kb downstream 10550 true Chr03: 46805383-46815932 Phaseolus vulgaris
Phvul.003G234600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46813933-46815932 Phaseolus vulgaris
Phvul.003G234600 5.0kb upstream 5.0kb upstream 13550 true Chr03: 46800383-46813932 Phaseolus vulgaris
Phvul.003G234600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46800383-46805382 Phaseolus vulgaris
Phvul.003G234600 5.0kb downstream 5.0kb downstream 13550 true Chr03: 46805383-46818932 Phaseolus vulgaris
Phvul.003G234600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46813933-46818932 Phaseolus vulgaris
Phvul.003G234600 10.0kb upstream 10.0kb upstream 18550 true Chr03: 46795383-46813932 Phaseolus vulgaris
Phvul.003G234600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46795383-46805382 Phaseolus vulgaris
Phvul.003G234600 10.0kb downstream 10.0kb downstream 18550 true Chr03: 46805383-46823932 Phaseolus vulgaris
Phvul.003G234600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46813933-46823932 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309992 5265 Fabidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68736 0.0 12.2289    
cufflinks 2.83305 0.0 13.7972    
cufflinks 2.91954 0.0 18.2511    
cufflinks 1.3763 0.0 7.21461   Low
cufflinks 1.3695 0.0 11.6674   Low
cufflinks 3.00556 0.0 16.156    
cufflinks 3.67102 0.0 20.3583    
cufflinks 7.36946 0.0 41.8537   High
cufflinks 2.15013 0.0 12.7625    
cufflinks 1.52992 0.0 13.9018    
cufflinks 2.26046 0.0 15.2429    

0 Strain