Gene : Phvul.003G148700 P. vulgaris v2.1
Defline:  (1 of 1) 5.3.1.5 - Xylose isomerase / D-xylose ketoisomerase Genomic Order:  1511
Name:  ? Phvul.003G148700 Secondary Identifier:  ? PAC:37147297
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G148700 0.5kb upstream 0.5kb upstream 6169 true Chr03: 35953295-35959463 Phaseolus vulgaris
Phvul.003G148700 0.5kb upstream 0.5kb upstream 500 false Chr03: 35953295-35953794 Phaseolus vulgaris
Phvul.003G148700 0.5kb downstream 0.5kb downstream 6169 true Chr03: 35953795-35959963 Phaseolus vulgaris
Phvul.003G148700 0.5kb downstream 0.5kb downstream 500 false Chr03: 35959464-35959963 Phaseolus vulgaris
Phvul.003G148700 1.0kb upstream 1.0kb upstream 6669 true Chr03: 35952795-35959463 Phaseolus vulgaris
Phvul.003G148700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35952795-35953794 Phaseolus vulgaris
Phvul.003G148700 1.0kb downstream 1.0kb downstream 6669 true Chr03: 35953795-35960463 Phaseolus vulgaris
Phvul.003G148700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35959464-35960463 Phaseolus vulgaris
Phvul.003G148700 2.0kb upstream 2.0kb upstream 7669 true Chr03: 35951795-35959463 Phaseolus vulgaris
Phvul.003G148700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35951795-35953794 Phaseolus vulgaris
Phvul.003G148700 2.0kb downstream 2.0kb downstream 7669 true Chr03: 35953795-35961463 Phaseolus vulgaris
Phvul.003G148700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35959464-35961463 Phaseolus vulgaris
Phvul.003G148700 5.0kb upstream 5.0kb upstream 10669 true Chr03: 35948795-35959463 Phaseolus vulgaris
Phvul.003G148700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35948795-35953794 Phaseolus vulgaris
Phvul.003G148700 5.0kb downstream 5.0kb downstream 10669 true Chr03: 35953795-35964463 Phaseolus vulgaris
Phvul.003G148700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35959464-35964463 Phaseolus vulgaris
Phvul.003G148700 10.0kb upstream 10.0kb upstream 15669 true Chr03: 35943795-35959463 Phaseolus vulgaris
Phvul.003G148700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35943795-35953794 Phaseolus vulgaris
Phvul.003G148700 10.0kb downstream 10.0kb downstream 15669 true Chr03: 35953795-35969463 Phaseolus vulgaris
Phvul.003G148700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35959464-35969463 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305478 5265 Fabidae View MSA
124066839 5270 Rosid View MSA
123746372 5271 Pentapetalae View MSA
122787328 5272 Eudicot View MSA
122044663 5273 Angiosperm View MSA
121345784 5274 Embryophyte View MSA
123425959 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 313.048 0.0 1112.21 High High
cufflinks 61.5419 0.0 168.138 High  
cufflinks 39.2701 0.0 103.518 High  
cufflinks 63.3018 0.0 172.227 High  
cufflinks 43.1702 0.0 113.966 High  
cufflinks 15.401 0.0 39.9465   Low
cufflinks 17.9404 0.0 46.4037   Low
cufflinks 26.4524 0.0 68.6542    
cufflinks 45.4548 0.0 120.949 High  
cufflinks 75.1055 0.0 208.854 High  
cufflinks 23.1274 0.0 59.7904    

0 Strain