Gene : Phvul.002G320300 P. vulgaris v2.1
Defline:  (1 of 2) K13119 - protein FAM50 (FAM50, XAP5) Genomic Order:  3197
Name:  ? Phvul.002G320300 Secondary Identifier:  ? PAC:37175088
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G320300 0.5kb upstream 0.5kb upstream 4834 true Chr02: 48608238-48613071 Phaseolus vulgaris
Phvul.002G320300 0.5kb upstream 0.5kb upstream 500 false Chr02: 48608238-48608737 Phaseolus vulgaris
Phvul.002G320300 0.5kb downstream 0.5kb downstream 4834 true Chr02: 48608738-48613571 Phaseolus vulgaris
Phvul.002G320300 0.5kb downstream 0.5kb downstream 500 false Chr02: 48613072-48613571 Phaseolus vulgaris
Phvul.002G320300 1.0kb upstream 1.0kb upstream 5334 true Chr02: 48607738-48613071 Phaseolus vulgaris
Phvul.002G320300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48607738-48608737 Phaseolus vulgaris
Phvul.002G320300 1.0kb downstream 1.0kb downstream 5334 true Chr02: 48608738-48614071 Phaseolus vulgaris
Phvul.002G320300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48613072-48614071 Phaseolus vulgaris
Phvul.002G320300 2.0kb upstream 2.0kb upstream 6334 true Chr02: 48606738-48613071 Phaseolus vulgaris
Phvul.002G320300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48606738-48608737 Phaseolus vulgaris
Phvul.002G320300 2.0kb downstream 2.0kb downstream 6334 true Chr02: 48608738-48615071 Phaseolus vulgaris
Phvul.002G320300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48613072-48615071 Phaseolus vulgaris
Phvul.002G320300 5.0kb upstream 5.0kb upstream 9334 true Chr02: 48603738-48613071 Phaseolus vulgaris
Phvul.002G320300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48603738-48608737 Phaseolus vulgaris
Phvul.002G320300 5.0kb downstream 5.0kb downstream 9334 true Chr02: 48608738-48618071 Phaseolus vulgaris
Phvul.002G320300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48613072-48618071 Phaseolus vulgaris
Phvul.002G320300 10.0kb upstream 10.0kb upstream 14334 true Chr02: 48598738-48613071 Phaseolus vulgaris
Phvul.002G320300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48598738-48608737 Phaseolus vulgaris
Phvul.002G320300 10.0kb downstream 10.0kb downstream 14334 true Chr02: 48608738-48623071 Phaseolus vulgaris
Phvul.002G320300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48613072-48623071 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299090 5265 Fabidae View MSA
124065875 5270 Rosid View MSA
123737386 5271 Pentapetalae View MSA
122792820 5272 Eudicot View MSA
122044828 5273 Angiosperm View MSA
121346265 5274 Embryophyte View MSA
123426608 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5011 0.0 50.5633    
cufflinks 19.0807 0.0 49.4549    
cufflinks 15.6053 0.0 40.7062   Low
cufflinks 17.0571 0.0 44.4809    
cufflinks 21.5555 0.0 55.8154    
cufflinks 17.1188 0.0 44.4853    
cufflinks 28.0137 0.0 72.5283 High High
cufflinks 22.5669 0.0 58.3349    
cufflinks 24.8582 0.0 64.2673   High
cufflinks 19.2972 0.0 50.0332    
cufflinks 20.7846 0.0 53.793    

0 Strain