Gene : Phvul.002G223300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF219 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2214
Name:  ? Phvul.002G223300 Secondary Identifier:  ? PAC:37178591
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G223300 0.5kb upstream 0.5kb upstream 2957 true Chr02: 39465977-39468933 Phaseolus vulgaris
Phvul.002G223300 0.5kb upstream 0.5kb upstream 500 false Chr02: 39465977-39466476 Phaseolus vulgaris
Phvul.002G223300 0.5kb downstream 0.5kb downstream 2957 true Chr02: 39466477-39469433 Phaseolus vulgaris
Phvul.002G223300 0.5kb downstream 0.5kb downstream 500 false Chr02: 39468934-39469433 Phaseolus vulgaris
Phvul.002G223300 1.0kb upstream 1.0kb upstream 3457 true Chr02: 39465477-39468933 Phaseolus vulgaris
Phvul.002G223300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39465477-39466476 Phaseolus vulgaris
Phvul.002G223300 1.0kb downstream 1.0kb downstream 3457 true Chr02: 39466477-39469933 Phaseolus vulgaris
Phvul.002G223300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39468934-39469933 Phaseolus vulgaris
Phvul.002G223300 2.0kb upstream 2.0kb upstream 4457 true Chr02: 39464477-39468933 Phaseolus vulgaris
Phvul.002G223300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39464477-39466476 Phaseolus vulgaris
Phvul.002G223300 2.0kb downstream 2.0kb downstream 4457 true Chr02: 39466477-39470933 Phaseolus vulgaris
Phvul.002G223300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39468934-39470933 Phaseolus vulgaris
Phvul.002G223300 5.0kb upstream 5.0kb upstream 7457 true Chr02: 39461477-39468933 Phaseolus vulgaris
Phvul.002G223300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39461477-39466476 Phaseolus vulgaris
Phvul.002G223300 5.0kb downstream 5.0kb downstream 7457 true Chr02: 39466477-39473933 Phaseolus vulgaris
Phvul.002G223300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39468934-39473933 Phaseolus vulgaris
Phvul.002G223300 10.0kb upstream 10.0kb upstream 12457 true Chr02: 39456477-39468933 Phaseolus vulgaris
Phvul.002G223300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39456477-39466476 Phaseolus vulgaris
Phvul.002G223300 10.0kb downstream 10.0kb downstream 12457 true Chr02: 39466477-39478933 Phaseolus vulgaris
Phvul.002G223300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39468934-39478933 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308848 5265 Fabidae View MSA
124060956 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.99949 0.0 24.7266    
cufflinks 23.9928 0.0 62.1424    
cufflinks 34.2082 0.0 88.551   High
cufflinks 43.8673 0.0 113.999 High High
cufflinks 11.4353 0.0 30.9688    
cufflinks 13.1738 0.0 35.0642    
cufflinks 5.3034 0.0 15.3385   Low
cufflinks 7.88191 0.0 21.8391    
cufflinks 3.02991 0.0 9.35621   Low
cufflinks 14.767 0.0 39.0645    
cufflinks 12.559 0.0 33.7398    

0 Strain