Gene : Phvul.002G010300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Genomic Order:  100
Name:  ? Phvul.002G010300 Secondary Identifier:  ? PAC:37178251
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G010300 0.5kb upstream 0.5kb upstream 5973 true Chr02: 1144506-1150478 Phaseolus vulgaris
Phvul.002G010300 0.5kb upstream 0.5kb upstream 500 false Chr02: 1144506-1145005 Phaseolus vulgaris
Phvul.002G010300 0.5kb downstream 0.5kb downstream 5973 true Chr02: 1145006-1150978 Phaseolus vulgaris
Phvul.002G010300 0.5kb downstream 0.5kb downstream 500 false Chr02: 1150479-1150978 Phaseolus vulgaris
Phvul.002G010300 1.0kb upstream 1.0kb upstream 6473 true Chr02: 1144006-1150478 Phaseolus vulgaris
Phvul.002G010300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1144006-1145005 Phaseolus vulgaris
Phvul.002G010300 1.0kb downstream 1.0kb downstream 6473 true Chr02: 1145006-1151478 Phaseolus vulgaris
Phvul.002G010300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1150479-1151478 Phaseolus vulgaris
Phvul.002G010300 2.0kb upstream 2.0kb upstream 7473 true Chr02: 1143006-1150478 Phaseolus vulgaris
Phvul.002G010300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1143006-1145005 Phaseolus vulgaris
Phvul.002G010300 2.0kb downstream 2.0kb downstream 7473 true Chr02: 1145006-1152478 Phaseolus vulgaris
Phvul.002G010300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1150479-1152478 Phaseolus vulgaris
Phvul.002G010300 5.0kb upstream 5.0kb upstream 10473 true Chr02: 1140006-1150478 Phaseolus vulgaris
Phvul.002G010300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1140006-1145005 Phaseolus vulgaris
Phvul.002G010300 5.0kb downstream 5.0kb downstream 10473 true Chr02: 1145006-1155478 Phaseolus vulgaris
Phvul.002G010300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1150479-1155478 Phaseolus vulgaris
Phvul.002G010300 10.0kb upstream 10.0kb upstream 15473 true Chr02: 1135006-1150478 Phaseolus vulgaris
Phvul.002G010300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1135006-1145005 Phaseolus vulgaris
Phvul.002G010300 10.0kb downstream 10.0kb downstream 15473 true Chr02: 1145006-1160478 Phaseolus vulgaris
Phvul.002G010300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1150479-1160478 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309992 5265 Fabidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.55766 0.0 18.1526    
cufflinks 8.09531 0.0 22.0227   High
cufflinks 6.20308 0.0 17.2488    
cufflinks 4.92395 0.0 14.0919   Low
cufflinks 6.59982 0.0 18.4203    
cufflinks 5.02553 0.0 14.2451   Low
cufflinks 5.44824 0.0 15.2997    
cufflinks 4.8116 0.0 13.6264   Low
cufflinks 6.33423 0.0 17.5698    
cufflinks 9.62936 0.0 25.8687   High
cufflinks 7.44056 0.0 20.4814    

0 Strain