Gene : Phvul.002G038100 P. vulgaris v2.1
Defline:  (1 of 1) K03538 - ribonuclease P protein subunit POP4 (POP4, RPP29) Genomic Order:  380
Name:  ? Phvul.002G038100 Secondary Identifier:  ? PAC:37174542
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G038100 0.5kb upstream 0.5kb upstream 4754 true Chr02: 3649707-3654460 Phaseolus vulgaris
Phvul.002G038100 0.5kb upstream 0.5kb upstream 500 false Chr02: 3649707-3650206 Phaseolus vulgaris
Phvul.002G038100 0.5kb downstream 0.5kb downstream 4754 true Chr02: 3650207-3654960 Phaseolus vulgaris
Phvul.002G038100 0.5kb downstream 0.5kb downstream 500 false Chr02: 3654461-3654960 Phaseolus vulgaris
Phvul.002G038100 1.0kb upstream 1.0kb upstream 5254 true Chr02: 3649207-3654460 Phaseolus vulgaris
Phvul.002G038100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3649207-3650206 Phaseolus vulgaris
Phvul.002G038100 1.0kb downstream 1.0kb downstream 5254 true Chr02: 3650207-3655460 Phaseolus vulgaris
Phvul.002G038100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3654461-3655460 Phaseolus vulgaris
Phvul.002G038100 2.0kb upstream 2.0kb upstream 6254 true Chr02: 3648207-3654460 Phaseolus vulgaris
Phvul.002G038100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3648207-3650206 Phaseolus vulgaris
Phvul.002G038100 2.0kb downstream 2.0kb downstream 6254 true Chr02: 3650207-3656460 Phaseolus vulgaris
Phvul.002G038100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3654461-3656460 Phaseolus vulgaris
Phvul.002G038100 5.0kb upstream 5.0kb upstream 9254 true Chr02: 3645207-3654460 Phaseolus vulgaris
Phvul.002G038100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3645207-3650206 Phaseolus vulgaris
Phvul.002G038100 5.0kb downstream 5.0kb downstream 9254 true Chr02: 3650207-3659460 Phaseolus vulgaris
Phvul.002G038100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3654461-3659460 Phaseolus vulgaris
Phvul.002G038100 10.0kb upstream 10.0kb upstream 14254 true Chr02: 3640207-3654460 Phaseolus vulgaris
Phvul.002G038100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3640207-3650206 Phaseolus vulgaris
Phvul.002G038100 10.0kb downstream 10.0kb downstream 14254 true Chr02: 3650207-3664460 Phaseolus vulgaris
Phvul.002G038100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3654461-3664460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041354 5273 Angiosperm View MSA
122300689 5265 Fabidae View MSA
124061511 5270 Rosid View MSA
123737721 5271 Pentapetalae View MSA
122789849 5272 Eudicot View MSA
121347484 5274 Embryophyte View MSA
123427364 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.49399 0.0 23.9564   High
cufflinks 4.14475 0.0 20.4861    
cufflinks 3.83563 0.0 19.2767   Low
cufflinks 5.56198 0.0 31.9679    
cufflinks 4.69856 0.0 20.2033    
cufflinks 3.57728 0.0 15.4236   Low
cufflinks 5.40225 0.0 24.5579    
cufflinks 5.55396 0.0 24.8152    
cufflinks 4.476 0.0 18.7359    
cufflinks 4.51108 0.0 18.2281    
cufflinks 4.86717 0.0 22.8412    

0 Strain