Gene : Phvul.001G014532 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13930 - RSAFD1-RELATED Genomic Order:  145
Name:  ? Phvul.001G014532 Secondary Identifier:  ? PAC:37167711
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7283 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7286 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G014532 0.5kb upstream 0.5kb upstream 5319 true Chr01: 1103022-1108340 Phaseolus vulgaris
Phvul.001G014532 0.5kb upstream 0.5kb upstream 500 false Chr01: 1103022-1103521 Phaseolus vulgaris
Phvul.001G014532 0.5kb downstream 0.5kb downstream 5319 true Chr01: 1103522-1108840 Phaseolus vulgaris
Phvul.001G014532 0.5kb downstream 0.5kb downstream 500 false Chr01: 1108341-1108840 Phaseolus vulgaris
Phvul.001G014532 1.0kb upstream 1.0kb upstream 5819 true Chr01: 1102522-1108340 Phaseolus vulgaris
Phvul.001G014532 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1102522-1103521 Phaseolus vulgaris
Phvul.001G014532 1.0kb downstream 1.0kb downstream 5819 true Chr01: 1103522-1109340 Phaseolus vulgaris
Phvul.001G014532 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1108341-1109340 Phaseolus vulgaris
Phvul.001G014532 2.0kb upstream 2.0kb upstream 6819 true Chr01: 1101522-1108340 Phaseolus vulgaris
Phvul.001G014532 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1101522-1103521 Phaseolus vulgaris
Phvul.001G014532 2.0kb downstream 2.0kb downstream 6819 true Chr01: 1103522-1110340 Phaseolus vulgaris
Phvul.001G014532 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1108341-1110340 Phaseolus vulgaris
Phvul.001G014532 5.0kb upstream 5.0kb upstream 9819 true Chr01: 1098522-1108340 Phaseolus vulgaris
Phvul.001G014532 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1098522-1103521 Phaseolus vulgaris
Phvul.001G014532 5.0kb downstream 5.0kb downstream 9819 true Chr01: 1103522-1113340 Phaseolus vulgaris
Phvul.001G014532 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1108341-1113340 Phaseolus vulgaris
Phvul.001G014532 10.0kb upstream 10.0kb upstream 14819 true Chr01: 1093522-1108340 Phaseolus vulgaris
Phvul.001G014532 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1093522-1103521 Phaseolus vulgaris
Phvul.001G014532 10.0kb downstream 10.0kb downstream 14819 true Chr01: 1103522-1118340 Phaseolus vulgaris
Phvul.001G014532 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1108341-1118340 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311762 5265 Fabidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82272 0.0 15.7771   Low
cufflinks 11.2439 0.0 29.2692    
cufflinks 11.7769 0.0 30.6225    
cufflinks 5.95498 0.0 16.2108   Low
cufflinks 9.02863 0.0 23.7139    
cufflinks 9.81323 0.0 25.7054    
cufflinks 11.9231 0.0 30.9394    
cufflinks 13.3891 0.0 34.6666   High
cufflinks 12.9036 0.0 33.4485    
cufflinks 9.657 0.0 25.2943    
cufflinks 10.1312 0.0 26.4656    

0 Strain