Gene : AUR62042626 C. quinoa v1.0
Defline:  (1 of 1) KOG1885 - Lysyl-tRNA synthetase (class II) Genomic Order:  8
Name:  ? AUR62042626 Secondary Identifier:  ? PAC:36303655
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62042626 0.5kb upstream 0.5kb upstream 18636 true C_Quinoa_Scaffold_3130: 86273-104908 Chenopodium quinoa
AUR62042626 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3130: 104409-104908 Chenopodium quinoa
AUR62042626 0.5kb downstream 0.5kb downstream 18636 true C_Quinoa_Scaffold_3130: 85773-104408 Chenopodium quinoa
AUR62042626 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3130: 85773-86272 Chenopodium quinoa
AUR62042626 1.0kb upstream 1.0kb upstream 19136 true C_Quinoa_Scaffold_3130: 86273-105408 Chenopodium quinoa
AUR62042626 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3130: 104409-105408 Chenopodium quinoa
AUR62042626 1.0kb downstream 1.0kb downstream 19136 true C_Quinoa_Scaffold_3130: 85273-104408 Chenopodium quinoa
AUR62042626 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3130: 85273-86272 Chenopodium quinoa
AUR62042626 2.0kb upstream 2.0kb upstream 20136 true C_Quinoa_Scaffold_3130: 86273-106408 Chenopodium quinoa
AUR62042626 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3130: 104409-106408 Chenopodium quinoa
AUR62042626 2.0kb downstream 2.0kb downstream 20136 true C_Quinoa_Scaffold_3130: 84273-104408 Chenopodium quinoa
AUR62042626 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3130: 84273-86272 Chenopodium quinoa
AUR62042626 5.0kb upstream 5.0kb upstream 23136 true C_Quinoa_Scaffold_3130: 86273-109408 Chenopodium quinoa
AUR62042626 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3130: 104409-109408 Chenopodium quinoa
AUR62042626 5.0kb downstream 5.0kb downstream 23136 true C_Quinoa_Scaffold_3130: 81273-104408 Chenopodium quinoa
AUR62042626 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3130: 81273-86272 Chenopodium quinoa
AUR62042626 10.0kb upstream 10.0kb upstream 28136 true C_Quinoa_Scaffold_3130: 86273-114408 Chenopodium quinoa
AUR62042626 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3130: 104409-114408 Chenopodium quinoa
AUR62042626 10.0kb downstream 10.0kb downstream 28136 true C_Quinoa_Scaffold_3130: 76273-104408 Chenopodium quinoa
AUR62042626 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3130: 76273-86272 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain