Gene : AUR62017630 C. quinoa v1.0

Defline:  (1 of 1) PF00153//PF03874//PF13962 - Mitochondrial carrier protein (Mito_carr) // RNA polymerase Rpb4 (RNA_pol_Rpb4) // Domain of unknown function (PGG) Genomic Order:  147
Name:  ? AUR62017630 Secondary Identifier:  ? PAC:36291521

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017630 0.5kb upstream 0.5kb upstream 8720 true C_Quinoa_Scaffold_3458: 2268630-2277349 Chenopodium quinoa
AUR62017630 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3458: 2276850-2277349 Chenopodium quinoa
AUR62017630 0.5kb downstream 0.5kb downstream 8720 true C_Quinoa_Scaffold_3458: 2268130-2276849 Chenopodium quinoa
AUR62017630 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3458: 2268130-2268629 Chenopodium quinoa
AUR62017630 1.0kb upstream 1.0kb upstream 9220 true C_Quinoa_Scaffold_3458: 2268630-2277849 Chenopodium quinoa
AUR62017630 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3458: 2276850-2277849 Chenopodium quinoa
AUR62017630 1.0kb downstream 1.0kb downstream 9220 true C_Quinoa_Scaffold_3458: 2267630-2276849 Chenopodium quinoa
AUR62017630 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3458: 2267630-2268629 Chenopodium quinoa
AUR62017630 2.0kb upstream 2.0kb upstream 10220 true C_Quinoa_Scaffold_3458: 2268630-2278849 Chenopodium quinoa
AUR62017630 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3458: 2276850-2278849 Chenopodium quinoa
AUR62017630 2.0kb downstream 2.0kb downstream 10220 true C_Quinoa_Scaffold_3458: 2266630-2276849 Chenopodium quinoa
AUR62017630 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3458: 2266630-2268629 Chenopodium quinoa
AUR62017630 5.0kb upstream 5.0kb upstream 13220 true C_Quinoa_Scaffold_3458: 2268630-2281849 Chenopodium quinoa
AUR62017630 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3458: 2276850-2281849 Chenopodium quinoa
AUR62017630 5.0kb downstream 5.0kb downstream 13220 true C_Quinoa_Scaffold_3458: 2263630-2276849 Chenopodium quinoa
AUR62017630 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3458: 2263630-2268629 Chenopodium quinoa
AUR62017630 10.0kb upstream 10.0kb upstream 18220 true C_Quinoa_Scaffold_3458: 2268630-2286849 Chenopodium quinoa
AUR62017630 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3458: 2276850-2286849 Chenopodium quinoa
AUR62017630 10.0kb downstream 10.0kb downstream 18220 true C_Quinoa_Scaffold_3458: 2258630-2276849 Chenopodium quinoa
AUR62017630 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3458: 2258630-2268629 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain