Gene : Solyc03g121110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KIM4_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  3154 Name:  ? Solyc03g121110.2
Secondary Identifier:  ? PAC:36135169
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g121110.2 0.5kb upstream 0.5kb upstream 3777 true SL2.50ch03: 69329223-69332999 Solanum lycopersicum
Solyc03g121110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 69332500-69332999 Solanum lycopersicum
Solyc03g121110.2 0.5kb downstream 0.5kb downstream 3777 true SL2.50ch03: 69328723-69332499 Solanum lycopersicum
Solyc03g121110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 69328723-69329222 Solanum lycopersicum
Solyc03g121110.2 1.0kb upstream 1.0kb upstream 4277 true SL2.50ch03: 69329223-69333499 Solanum lycopersicum
Solyc03g121110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 69332500-69333499 Solanum lycopersicum
Solyc03g121110.2 1.0kb downstream 1.0kb downstream 4277 true SL2.50ch03: 69328223-69332499 Solanum lycopersicum
Solyc03g121110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 69328223-69329222 Solanum lycopersicum
Solyc03g121110.2 2.0kb upstream 2.0kb upstream 5277 true SL2.50ch03: 69329223-69334499 Solanum lycopersicum
Solyc03g121110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 69332500-69334499 Solanum lycopersicum
Solyc03g121110.2 2.0kb downstream 2.0kb downstream 5277 true SL2.50ch03: 69327223-69332499 Solanum lycopersicum
Solyc03g121110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 69327223-69329222 Solanum lycopersicum
Solyc03g121110.2 5.0kb upstream 5.0kb upstream 8277 true SL2.50ch03: 69329223-69337499 Solanum lycopersicum
Solyc03g121110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 69332500-69337499 Solanum lycopersicum
Solyc03g121110.2 5.0kb downstream 5.0kb downstream 8277 true SL2.50ch03: 69324223-69332499 Solanum lycopersicum
Solyc03g121110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 69324223-69329222 Solanum lycopersicum
Solyc03g121110.2 10.0kb upstream 10.0kb upstream 13277 true SL2.50ch03: 69329223-69342499 Solanum lycopersicum
Solyc03g121110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 69332500-69342499 Solanum lycopersicum
Solyc03g121110.2 10.0kb downstream 10.0kb downstream 13277 true SL2.50ch03: 69319223-69332499 Solanum lycopersicum
Solyc03g121110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 69319223-69329222 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472904 5263 Asterids View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain