Gene : Solyc07g045290.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR24096:SF219 - LONG CHAIN ACYL-COA SYNTHETASE 8 Description:  Long-chain-fatty-acid--CoA ligase 3 (AHRD V1 **** ACSL3_HUMAN); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase
Genomic Order:  1372 Name:  ? Solyc07g045290.2
Secondary Identifier:  ? PAC:36160331
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1121 Solanum lycopersicum pathologic  
Slycopersicum PWY-321 Solanum lycopersicum pathologic  
Slycopersicum PWY-5136 Solanum lycopersicum pathologic  
Slycopersicum PWY-5143 Solanum lycopersicum pathologic  
Slycopersicum PWY-5147 Solanum lycopersicum pathologic  
Slycopersicum PWY-5156 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-5885 Solanum lycopersicum pathologic  
Slycopersicum PWY-5971 Solanum lycopersicum pathologic  
Slycopersicum PWY-5989 Solanum lycopersicum pathologic  
Slycopersicum PWY66-389 Solanum lycopersicum pathologic  
Slycopersicum PWY-6733 Solanum lycopersicum pathologic  
Slycopersicum PWY-6803 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g045290.2 0.5kb upstream 0.5kb upstream 8134 true SL2.50ch07: 58393054-58401187 Solanum lycopersicum
Solyc07g045290.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 58393054-58393553 Solanum lycopersicum
Solyc07g045290.2 0.5kb downstream 0.5kb downstream 8134 true SL2.50ch07: 58393554-58401687 Solanum lycopersicum
Solyc07g045290.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 58401188-58401687 Solanum lycopersicum
Solyc07g045290.2 1.0kb upstream 1.0kb upstream 8634 true SL2.50ch07: 58392554-58401187 Solanum lycopersicum
Solyc07g045290.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 58392554-58393553 Solanum lycopersicum
Solyc07g045290.2 1.0kb downstream 1.0kb downstream 8634 true SL2.50ch07: 58393554-58402187 Solanum lycopersicum
Solyc07g045290.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 58401188-58402187 Solanum lycopersicum
Solyc07g045290.2 2.0kb upstream 2.0kb upstream 9634 true SL2.50ch07: 58391554-58401187 Solanum lycopersicum
Solyc07g045290.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 58391554-58393553 Solanum lycopersicum
Solyc07g045290.2 2.0kb downstream 2.0kb downstream 9634 true SL2.50ch07: 58393554-58403187 Solanum lycopersicum
Solyc07g045290.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 58401188-58403187 Solanum lycopersicum
Solyc07g045290.2 5.0kb upstream 5.0kb upstream 12634 true SL2.50ch07: 58388554-58401187 Solanum lycopersicum
Solyc07g045290.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 58388554-58393553 Solanum lycopersicum
Solyc07g045290.2 5.0kb downstream 5.0kb downstream 12634 true SL2.50ch07: 58393554-58406187 Solanum lycopersicum
Solyc07g045290.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 58401188-58406187 Solanum lycopersicum
Solyc07g045290.2 10.0kb upstream 10.0kb upstream 17634 true SL2.50ch07: 58383554-58401187 Solanum lycopersicum
Solyc07g045290.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 58383554-58393553 Solanum lycopersicum
Solyc07g045290.2 10.0kb downstream 10.0kb downstream 17634 true SL2.50ch07: 58393554-58411187 Solanum lycopersicum
Solyc07g045290.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 58401188-58411187 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466424 5263 Asterids View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain