Gene : Solyc08g077410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) KOG3057 - Cytochrome c oxidase, subunit VIb/COX12 Description:  Cytochrome c oxidase subunit 6b (AHRD V1 *-*- Q9FE02_ORYSJ); contains Interpro domain(s) IPR003213 Cytochrome c oxidase, subunit VIb
Genomic Order:  1868 Name:  ? Solyc08g077410.2
Secondary Identifier:  ? PAC:36149450
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g077410.2 0.5kb upstream 0.5kb upstream 2097 true SL2.50ch08: 61273393-61275489 Solanum lycopersicum
Solyc08g077410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61273393-61273892 Solanum lycopersicum
Solyc08g077410.2 0.5kb downstream 0.5kb downstream 2097 true SL2.50ch08: 61273893-61275989 Solanum lycopersicum
Solyc08g077410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61275490-61275989 Solanum lycopersicum
Solyc08g077410.2 1.0kb upstream 1.0kb upstream 2597 true SL2.50ch08: 61272893-61275489 Solanum lycopersicum
Solyc08g077410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61272893-61273892 Solanum lycopersicum
Solyc08g077410.2 1.0kb downstream 1.0kb downstream 2597 true SL2.50ch08: 61273893-61276489 Solanum lycopersicum
Solyc08g077410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61275490-61276489 Solanum lycopersicum
Solyc08g077410.2 2.0kb upstream 2.0kb upstream 3597 true SL2.50ch08: 61271893-61275489 Solanum lycopersicum
Solyc08g077410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61271893-61273892 Solanum lycopersicum
Solyc08g077410.2 2.0kb downstream 2.0kb downstream 3597 true SL2.50ch08: 61273893-61277489 Solanum lycopersicum
Solyc08g077410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61275490-61277489 Solanum lycopersicum
Solyc08g077410.2 5.0kb upstream 5.0kb upstream 6597 true SL2.50ch08: 61268893-61275489 Solanum lycopersicum
Solyc08g077410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61268893-61273892 Solanum lycopersicum
Solyc08g077410.2 5.0kb downstream 5.0kb downstream 6597 true SL2.50ch08: 61273893-61280489 Solanum lycopersicum
Solyc08g077410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61275490-61280489 Solanum lycopersicum
Solyc08g077410.2 10.0kb upstream 10.0kb upstream 11597 true SL2.50ch08: 61263893-61275489 Solanum lycopersicum
Solyc08g077410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61263893-61273892 Solanum lycopersicum
Solyc08g077410.2 10.0kb downstream 10.0kb downstream 11597 true SL2.50ch08: 61273893-61285489 Solanum lycopersicum
Solyc08g077410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61275490-61285489 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475480 5263 Asterids View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain