Gene : Solyc04g016290.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF07498 - Rho termination factor, N-terminal domain (Rho_N) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR011112 Rho termination factor, N-terminal
Genomic Order:  726 Name:  ? Solyc04g016290.2
Secondary Identifier:  ? PAC:36143238
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g016290.2 0.5kb upstream 0.5kb upstream 4079 true SL2.50ch04: 7074383-7078461 Solanum lycopersicum
Solyc04g016290.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 7074383-7074882 Solanum lycopersicum
Solyc04g016290.2 0.5kb downstream 0.5kb downstream 4079 true SL2.50ch04: 7074883-7078961 Solanum lycopersicum
Solyc04g016290.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 7078462-7078961 Solanum lycopersicum
Solyc04g016290.2 1.0kb upstream 1.0kb upstream 4579 true SL2.50ch04: 7073883-7078461 Solanum lycopersicum
Solyc04g016290.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 7073883-7074882 Solanum lycopersicum
Solyc04g016290.2 1.0kb downstream 1.0kb downstream 4579 true SL2.50ch04: 7074883-7079461 Solanum lycopersicum
Solyc04g016290.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 7078462-7079461 Solanum lycopersicum
Solyc04g016290.2 2.0kb upstream 2.0kb upstream 5579 true SL2.50ch04: 7072883-7078461 Solanum lycopersicum
Solyc04g016290.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 7072883-7074882 Solanum lycopersicum
Solyc04g016290.2 2.0kb downstream 2.0kb downstream 5579 true SL2.50ch04: 7074883-7080461 Solanum lycopersicum
Solyc04g016290.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 7078462-7080461 Solanum lycopersicum
Solyc04g016290.2 5.0kb upstream 5.0kb upstream 8579 true SL2.50ch04: 7069883-7078461 Solanum lycopersicum
Solyc04g016290.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 7069883-7074882 Solanum lycopersicum
Solyc04g016290.2 5.0kb downstream 5.0kb downstream 8579 true SL2.50ch04: 7074883-7083461 Solanum lycopersicum
Solyc04g016290.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 7078462-7083461 Solanum lycopersicum
Solyc04g016290.2 10.0kb upstream 10.0kb upstream 13579 true SL2.50ch04: 7064883-7078461 Solanum lycopersicum
Solyc04g016290.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 7064883-7074882 Solanum lycopersicum
Solyc04g016290.2 10.0kb downstream 10.0kb downstream 13579 true SL2.50ch04: 7074883-7088461 Solanum lycopersicum
Solyc04g016290.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 7078462-7088461 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791815 5273 Angiosperm View MSA
121481470 5263 Asterids View MSA
123744444 5271 Pentapetalae View MSA
122794126 5272 Eudicot View MSA
121063104 5274 Embryophyte View MSA
123102887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain