Gene : MicpuC2.estExt_fgenesh1_pg.C_50198 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) PF08016//PF13385 - Polycystin cation channel (PKD_channel) // Concanavalin A-like lectin/glucanases superfamily (Laminin_G_3) Genomic Order:  338
Name:  ? MicpuC2.estExt_fgenesh1_pg.C_50198 Secondary Identifier:  ? PAC:27341859
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MicpuC2.estExt_fgenesh1_pg.C_50198 0.5kb upstream 0.5kb upstream 22085 true scaffold_5: 678554-700638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 678554-679053 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 0.5kb downstream 0.5kb downstream 22085 true scaffold_5: 679054-701138 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 700639-701138 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 1.0kb upstream 1.0kb upstream 22585 true scaffold_5: 678054-700638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 678054-679053 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 1.0kb downstream 1.0kb downstream 22585 true scaffold_5: 679054-701638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 700639-701638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 2.0kb upstream 2.0kb upstream 23585 true scaffold_5: 677054-700638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 677054-679053 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 2.0kb downstream 2.0kb downstream 23585 true scaffold_5: 679054-702638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 700639-702638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 5.0kb upstream 5.0kb upstream 26585 true scaffold_5: 674054-700638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 674054-679053 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 5.0kb downstream 5.0kb downstream 26585 true scaffold_5: 679054-705638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 700639-705638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 10.0kb upstream 10.0kb upstream 31585 true scaffold_5: 669054-700638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 669054-679053 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 10.0kb downstream 10.0kb downstream 31585 true scaffold_5: 679054-710638 Micromonas pusilla CCMP1545
MicpuC2.estExt_fgenesh1_pg.C_50198 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 700639-710638 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124101182 5260 Chlorophyte Singleton cluster - no MSA
123416570 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier