Gene : fgenesh1_pm_3_num_94 M. pusilla CCMP1545 v3.0

Defline:  (1 of 1) KOG0298//KOG1001 - DEAD box-containing helicase-like transcription factor/DNA repair protein // Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily Genomic Order:  188
Name:  ? fgenesh1_pm_3_num_94 Secondary Identifier:  ? PAC:27347597

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pm_3_num_94 0.5kb upstream 0.5kb upstream 6099 true scaffold_3: 380352-386450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 380352-380851 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 0.5kb downstream 0.5kb downstream 6099 true scaffold_3: 380852-386950 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 386451-386950 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 1.0kb upstream 1.0kb upstream 6599 true scaffold_3: 379852-386450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 379852-380851 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 1.0kb downstream 1.0kb downstream 6599 true scaffold_3: 380852-387450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 386451-387450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 2.0kb upstream 2.0kb upstream 7599 true scaffold_3: 378852-386450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 378852-380851 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 2.0kb downstream 2.0kb downstream 7599 true scaffold_3: 380852-388450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 386451-388450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 5.0kb upstream 5.0kb upstream 10599 true scaffold_3: 375852-386450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 375852-380851 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 5.0kb downstream 5.0kb downstream 10599 true scaffold_3: 380852-391450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 386451-391450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 10.0kb upstream 10.0kb upstream 15599 true scaffold_3: 370852-386450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 370852-380851 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 10.0kb downstream 10.0kb downstream 15599 true scaffold_3: 380852-396450 Micromonas pusilla CCMP1545
fgenesh1_pm_3_num_94 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 386451-396450 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124105082 5260 Chlorophyte View MSA
123419981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier