Gene : Tp57577_TGAC_v2_gene20173 T. pratense v2
Defline:  (1 of 1) K15449 - tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] (TYW1) Genomic Order:  37
Name:  ? Tp57577_TGAC_v2_gene20173 Secondary Identifier:  ? PAC:35959917
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7283 Trifolium pratense pathologic  
Tpratense PWY-7286 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20173 0.5kb upstream 0.5kb upstream 5545 true Tp57577_TGAC_v2_scaf_312: 207106-212650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_312: 207106-207605 Trifolium pratense
Tp57577_TGAC_v2_gene20173 0.5kb downstream 0.5kb downstream 5545 true Tp57577_TGAC_v2_scaf_312: 207606-213150 Trifolium pratense
Tp57577_TGAC_v2_gene20173 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_312: 212651-213150 Trifolium pratense
Tp57577_TGAC_v2_gene20173 1.0kb upstream 1.0kb upstream 6045 true Tp57577_TGAC_v2_scaf_312: 206606-212650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_312: 206606-207605 Trifolium pratense
Tp57577_TGAC_v2_gene20173 1.0kb downstream 1.0kb downstream 6045 true Tp57577_TGAC_v2_scaf_312: 207606-213650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_312: 212651-213650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 2.0kb upstream 2.0kb upstream 7045 true Tp57577_TGAC_v2_scaf_312: 205606-212650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_312: 205606-207605 Trifolium pratense
Tp57577_TGAC_v2_gene20173 2.0kb downstream 2.0kb downstream 7045 true Tp57577_TGAC_v2_scaf_312: 207606-214650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_312: 212651-214650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 5.0kb upstream 5.0kb upstream 10045 true Tp57577_TGAC_v2_scaf_312: 202606-212650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_312: 202606-207605 Trifolium pratense
Tp57577_TGAC_v2_gene20173 5.0kb downstream 5.0kb downstream 10045 true Tp57577_TGAC_v2_scaf_312: 207606-217650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_312: 212651-217650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 10.0kb upstream 10.0kb upstream 15045 true Tp57577_TGAC_v2_scaf_312: 197606-212650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_312: 197606-207605 Trifolium pratense
Tp57577_TGAC_v2_gene20173 10.0kb downstream 10.0kb downstream 15045 true Tp57577_TGAC_v2_scaf_312: 207606-222650 Trifolium pratense
Tp57577_TGAC_v2_gene20173 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_312: 212651-222650 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311762 5265 Fabidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain