Gene : AL6G31030 A. lyrata v2.1

Defline:  (1 of 2) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Genomic Order:  1990
Name:  ? AL6G31030 Secondary Identifier:  ? PAC:35926368

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G31030 0.5kb upstream 0.5kb upstream 4215   true scaffold_6: 8248819-8253033 Arabidopsis lyrata
AL6G31030 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8248819-8249318 Arabidopsis lyrata
AL6G31030 0.5kb downstream 0.5kb downstream 4215   true scaffold_6: 8249319-8253533 Arabidopsis lyrata
AL6G31030 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8253034-8253533 Arabidopsis lyrata
AL6G31030 1.0kb upstream 1.0kb upstream 4715   true scaffold_6: 8248319-8253033 Arabidopsis lyrata
AL6G31030 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8248319-8249318 Arabidopsis lyrata
AL6G31030 1.0kb downstream 1.0kb downstream 4715   true scaffold_6: 8249319-8254033 Arabidopsis lyrata
AL6G31030 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8253034-8254033 Arabidopsis lyrata
AL6G31030 2.0kb upstream 2.0kb upstream 5715   true scaffold_6: 8247319-8253033 Arabidopsis lyrata
AL6G31030 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8247319-8249318 Arabidopsis lyrata
AL6G31030 2.0kb downstream 2.0kb downstream 5715   true scaffold_6: 8249319-8255033 Arabidopsis lyrata
AL6G31030 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8253034-8255033 Arabidopsis lyrata
AL6G31030 5.0kb upstream 5.0kb upstream 8715   true scaffold_6: 8244319-8253033 Arabidopsis lyrata
AL6G31030 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8244319-8249318 Arabidopsis lyrata
AL6G31030 5.0kb downstream 5.0kb downstream 8715   true scaffold_6: 8249319-8258033 Arabidopsis lyrata
AL6G31030 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8253034-8258033 Arabidopsis lyrata
AL6G31030 10.0kb upstream 10.0kb upstream 13715   true scaffold_6: 8239319-8253033 Arabidopsis lyrata
AL6G31030 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8239319-8249318 Arabidopsis lyrata
AL6G31030 10.0kb downstream 10.0kb downstream 13715   true scaffold_6: 8249319-8263033 Arabidopsis lyrata
AL6G31030 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8253034-8263033 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122377927 5261 Brassicaceae View MSA
123801677 5264 Brassicales-Malvales View MSA
124298953 5266 SBM View MSA
124150482 5268 Malvidae View MSA
123876084 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain