Gene : AL3G34800 A. lyrata v2.1

Defline:  (1 of 2) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  2367
Name:  ? AL3G34800 Secondary Identifier:  ? PAC:35941249

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G34800 0.5kb upstream 0.5kb upstream 3188   true scaffold_3: 9209451-9212638 Arabidopsis lyrata
AL3G34800 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 9209451-9209950 Arabidopsis lyrata
AL3G34800 0.5kb downstream 0.5kb downstream 3188   true scaffold_3: 9209951-9213138 Arabidopsis lyrata
AL3G34800 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 9212639-9213138 Arabidopsis lyrata
AL3G34800 1.0kb upstream 1.0kb upstream 3688   true scaffold_3: 9208951-9212638 Arabidopsis lyrata
AL3G34800 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 9208951-9209950 Arabidopsis lyrata
AL3G34800 1.0kb downstream 1.0kb downstream 3688   true scaffold_3: 9209951-9213638 Arabidopsis lyrata
AL3G34800 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 9212639-9213638 Arabidopsis lyrata
AL3G34800 2.0kb upstream 2.0kb upstream 4688   true scaffold_3: 9207951-9212638 Arabidopsis lyrata
AL3G34800 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 9207951-9209950 Arabidopsis lyrata
AL3G34800 2.0kb downstream 2.0kb downstream 4688   true scaffold_3: 9209951-9214638 Arabidopsis lyrata
AL3G34800 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 9212639-9214638 Arabidopsis lyrata
AL3G34800 5.0kb upstream 5.0kb upstream 7688   true scaffold_3: 9204951-9212638 Arabidopsis lyrata
AL3G34800 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 9204951-9209950 Arabidopsis lyrata
AL3G34800 5.0kb downstream 5.0kb downstream 7688   true scaffold_3: 9209951-9217638 Arabidopsis lyrata
AL3G34800 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 9212639-9217638 Arabidopsis lyrata
AL3G34800 10.0kb upstream 10.0kb upstream 12688   true scaffold_3: 9199951-9212638 Arabidopsis lyrata
AL3G34800 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 9199951-9209950 Arabidopsis lyrata
AL3G34800 10.0kb downstream 10.0kb downstream 12688   true scaffold_3: 9209951-9222638 Arabidopsis lyrata
AL3G34800 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 9212639-9222638 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367853 5261 Brassicaceae View MSA
123833303 5264 Brassicales-Malvales View MSA
124345204 5266 SBM View MSA
124244085 5268 Malvidae View MSA
124069702 5270 Rosid View MSA
123749307 5271 Pentapetalae View MSA
122794727 5272 Eudicot View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain