Gene : AL3G21810 A. lyrata v2.1

Defline:  (1 of 12) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase Genomic Order:  1121
Name:  ? AL3G21810 Secondary Identifier:  ? PAC:35940440

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3301 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21810 0.5kb upstream 0.5kb upstream 3473   true scaffold_3: 4172804-4176276 Arabidopsis lyrata
AL3G21810 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4172804-4173303 Arabidopsis lyrata
AL3G21810 0.5kb downstream 0.5kb downstream 3473   true scaffold_3: 4173304-4176776 Arabidopsis lyrata
AL3G21810 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4176277-4176776 Arabidopsis lyrata
AL3G21810 1.0kb upstream 1.0kb upstream 3973   true scaffold_3: 4172304-4176276 Arabidopsis lyrata
AL3G21810 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4172304-4173303 Arabidopsis lyrata
AL3G21810 1.0kb downstream 1.0kb downstream 3973   true scaffold_3: 4173304-4177276 Arabidopsis lyrata
AL3G21810 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4176277-4177276 Arabidopsis lyrata
AL3G21810 2.0kb upstream 2.0kb upstream 4973   true scaffold_3: 4171304-4176276 Arabidopsis lyrata
AL3G21810 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4171304-4173303 Arabidopsis lyrata
AL3G21810 2.0kb downstream 2.0kb downstream 4973   true scaffold_3: 4173304-4178276 Arabidopsis lyrata
AL3G21810 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4176277-4178276 Arabidopsis lyrata
AL3G21810 5.0kb upstream 5.0kb upstream 7973   true scaffold_3: 4168304-4176276 Arabidopsis lyrata
AL3G21810 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4168304-4173303 Arabidopsis lyrata
AL3G21810 5.0kb downstream 5.0kb downstream 7973   true scaffold_3: 4173304-4181276 Arabidopsis lyrata
AL3G21810 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4176277-4181276 Arabidopsis lyrata
AL3G21810 10.0kb upstream 10.0kb upstream 12973   true scaffold_3: 4163304-4176276 Arabidopsis lyrata
AL3G21810 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4163304-4173303 Arabidopsis lyrata
AL3G21810 10.0kb downstream 10.0kb downstream 12973   true scaffold_3: 4173304-4186276 Arabidopsis lyrata
AL3G21810 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4176277-4186276 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain