Gene : AL3G14020 A. lyrata v2.1

Defline:  (1 of 2) PTHR10836:SF53 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC2, CYTOSOLIC Genomic Order:  388
Name:  ? AL3G14020 Secondary Identifier:  ? PAC:35944000

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-1042 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata SUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G14020 0.5kb upstream 0.5kb upstream 2900   true scaffold_3: 1365937-1368836 Arabidopsis lyrata
AL3G14020 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1365937-1366436 Arabidopsis lyrata
AL3G14020 0.5kb downstream 0.5kb downstream 2900   true scaffold_3: 1366437-1369336 Arabidopsis lyrata
AL3G14020 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1368837-1369336 Arabidopsis lyrata
AL3G14020 1.0kb upstream 1.0kb upstream 3400   true scaffold_3: 1365437-1368836 Arabidopsis lyrata
AL3G14020 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1365437-1366436 Arabidopsis lyrata
AL3G14020 1.0kb downstream 1.0kb downstream 3400   true scaffold_3: 1366437-1369836 Arabidopsis lyrata
AL3G14020 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1368837-1369836 Arabidopsis lyrata
AL3G14020 2.0kb upstream 2.0kb upstream 4400   true scaffold_3: 1364437-1368836 Arabidopsis lyrata
AL3G14020 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1364437-1366436 Arabidopsis lyrata
AL3G14020 2.0kb downstream 2.0kb downstream 4400   true scaffold_3: 1366437-1370836 Arabidopsis lyrata
AL3G14020 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1368837-1370836 Arabidopsis lyrata
AL3G14020 5.0kb upstream 5.0kb upstream 7400   true scaffold_3: 1361437-1368836 Arabidopsis lyrata
AL3G14020 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1361437-1366436 Arabidopsis lyrata
AL3G14020 5.0kb downstream 5.0kb downstream 7400   true scaffold_3: 1366437-1373836 Arabidopsis lyrata
AL3G14020 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1368837-1373836 Arabidopsis lyrata
AL3G14020 10.0kb upstream 10.0kb upstream 12400   true scaffold_3: 1356437-1368836 Arabidopsis lyrata
AL3G14020 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1356437-1366436 Arabidopsis lyrata
AL3G14020 10.0kb downstream 10.0kb downstream 12400   true scaffold_3: 1366437-1378836 Arabidopsis lyrata
AL3G14020 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1368837-1378836 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381041 5261 Brassicaceae View MSA
123840158 5264 Brassicales-Malvales View MSA
124346732 5266 SBM View MSA
124250703 5268 Malvidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain