Gene : AL2G31260 A. lyrata v2.1

Defline:  (1 of 1) PF04428 - Choline kinase N terminus (Choline_kin_N) Genomic Order:  1857
Name:  ? AL2G31260 Secondary Identifier:  ? PAC:35945799

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3385 Arabidopsis lyrata pathologic  
Alyrata PWY4FS-6 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G31260 0.5kb upstream 0.5kb upstream 2688   true scaffold_2: 14997611-15000298 Arabidopsis lyrata
AL2G31260 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 14997611-14998110 Arabidopsis lyrata
AL2G31260 0.5kb downstream 0.5kb downstream 2688   true scaffold_2: 14998111-15000798 Arabidopsis lyrata
AL2G31260 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 15000299-15000798 Arabidopsis lyrata
AL2G31260 1.0kb upstream 1.0kb upstream 3188   true scaffold_2: 14997111-15000298 Arabidopsis lyrata
AL2G31260 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 14997111-14998110 Arabidopsis lyrata
AL2G31260 1.0kb downstream 1.0kb downstream 3188   true scaffold_2: 14998111-15001298 Arabidopsis lyrata
AL2G31260 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 15000299-15001298 Arabidopsis lyrata
AL2G31260 2.0kb upstream 2.0kb upstream 4188   true scaffold_2: 14996111-15000298 Arabidopsis lyrata
AL2G31260 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 14996111-14998110 Arabidopsis lyrata
AL2G31260 2.0kb downstream 2.0kb downstream 4188   true scaffold_2: 14998111-15002298 Arabidopsis lyrata
AL2G31260 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 15000299-15002298 Arabidopsis lyrata
AL2G31260 5.0kb upstream 5.0kb upstream 7188   true scaffold_2: 14993111-15000298 Arabidopsis lyrata
AL2G31260 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 14993111-14998110 Arabidopsis lyrata
AL2G31260 5.0kb downstream 5.0kb downstream 7188   true scaffold_2: 14998111-15005298 Arabidopsis lyrata
AL2G31260 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 15000299-15005298 Arabidopsis lyrata
AL2G31260 10.0kb upstream 10.0kb upstream 12188   true scaffold_2: 14988111-15000298 Arabidopsis lyrata
AL2G31260 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 14988111-14998110 Arabidopsis lyrata
AL2G31260 10.0kb downstream 10.0kb downstream 12188   true scaffold_2: 14998111-15010298 Arabidopsis lyrata
AL2G31260 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 15000299-15010298 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363118 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain