Gene : e_gw1.10.174.1 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  394
Name:  ? e_gw1.10.174.1 Secondary Identifier:  ? PAC:27385686
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5943 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5947 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
e_gw1.10.174.1 0.5kb upstream 0.5kb upstream 2667 true scaffold_10: 1860931-1863597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 1860931-1861430 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 0.5kb downstream 0.5kb downstream 2667 true scaffold_10: 1861431-1864097 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 1863598-1864097 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 1.0kb upstream 1.0kb upstream 3167 true scaffold_10: 1860431-1863597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 1860431-1861430 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 1.0kb downstream 1.0kb downstream 3167 true scaffold_10: 1861431-1864597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 1863598-1864597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 2.0kb upstream 2.0kb upstream 4167 true scaffold_10: 1859431-1863597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 1859431-1861430 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 2.0kb downstream 2.0kb downstream 4167 true scaffold_10: 1861431-1865597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 1863598-1865597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 5.0kb upstream 5.0kb upstream 7167 true scaffold_10: 1856431-1863597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 1856431-1861430 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 5.0kb downstream 5.0kb downstream 7167 true scaffold_10: 1861431-1868597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 1863598-1868597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 10.0kb upstream 10.0kb upstream 12167 true scaffold_10: 1851431-1863597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 1851431-1861430 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 10.0kb downstream 10.0kb downstream 12167 true scaffold_10: 1861431-1873597 Coccomyxa subellipsoidea C-169
e_gw1.10.174.1 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 1863598-1873597 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094946 5260 Chlorophyte Singleton cluster - no MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier