Gene : e_gw1.2.138.1 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  73
Name:  ? e_gw1.2.138.1 Secondary Identifier:  ? PAC:27393643
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CAROTENOID-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5943 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-5947 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
e_gw1.2.138.1 0.5kb upstream 0.5kb upstream 3903 true scaffold_2: 458402-462304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 458402-458901 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 0.5kb downstream 0.5kb downstream 3903 true scaffold_2: 458902-462804 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 462305-462804 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 1.0kb upstream 1.0kb upstream 4403 true scaffold_2: 457902-462304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 457902-458901 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 1.0kb downstream 1.0kb downstream 4403 true scaffold_2: 458902-463304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 462305-463304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 2.0kb upstream 2.0kb upstream 5403 true scaffold_2: 456902-462304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 456902-458901 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 2.0kb downstream 2.0kb downstream 5403 true scaffold_2: 458902-464304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 462305-464304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 5.0kb upstream 5.0kb upstream 8403 true scaffold_2: 453902-462304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 453902-458901 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 5.0kb downstream 5.0kb downstream 8403 true scaffold_2: 458902-467304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 462305-467304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 10.0kb upstream 10.0kb upstream 13403 true scaffold_2: 448902-462304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 448902-458901 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 10.0kb downstream 10.0kb downstream 13403 true scaffold_2: 458902-472304 Coccomyxa subellipsoidea C-169
e_gw1.2.138.1 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 462305-472304 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108524 5260 Chlorophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier