GO Term : GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA GO

Namespace:  biological_process Obsolete:  false
description  Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

39 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0000290 e_gw1.15.154.1  
OntologyAnnotation GO:0000290 18391 GO
GOAnnotation GO:0000290 e_gw1.3.77.1  
OntologyAnnotation GO:0000290 152650 GO
GOAnnotation GO:0000290 fgenesh2_pg.C_Chr_03000375  
OntologyAnnotation GO:0000290 99594 GO
GOAnnotation GO:0000290 e_gwEuk.9.351.1  
OntologyAnnotation GO:0000290 34772 GO
OntologyAnnotation GO:0000290 Cre10.g432650.t1.1 GO
GOAnnotation GO:0000290 Cre10.g432650  
GOAnnotation GO:0000290 SapurV1A.0107s0250  
OntologyAnnotation GO:0000290 SapurV1A.0107s0250.1.p GO
GOAnnotation GO:0000290 Cz14g18040  
GOAnnotation GO:0000290 Cz14g18030  
OntologyAnnotation GO:0000290 Cz14g18030.t1 GO
OntologyAnnotation GO:0000290 Cz14g18040.t1 GO
GOAnnotation GO:0000290 Bobra.0022s0062  
OntologyAnnotation GO:0000290 Bobra.0022s0062.1.p GO
GOAnnotation GO:0000290 Cocit.L4519  
OntologyAnnotation GO:0000290 Cocit.L4519.1.p GO
GOAnnotation GO:0000290 SpFC.03G052400  
OntologyAnnotation GO:0000290 SpFC.03G052400.1.p GO
GOAnnotation GO:0000290 Sapur.003G051300  
OntologyAnnotation GO:0000290 Sapur.003G051300.1.p GO
OntologyAnnotation GO:0000290 Sapur.003G051300.2.p GO
OntologyAnnotation GO:0000290 Zosma01g15580 GO
GOAnnotation GO:0000290 Zosma01g15590  
GOAnnotation GO:0000290 Zosma01g15580  
OntologyAnnotation GO:0000290 Zosma01g15590 GO
GOAnnotation GO:0000290 Zosma01g33710  

32 Parents

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0006402 mRNA catabolic process The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0019439 aromatic compound catabolic process The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.
GO:0016070 RNA metabolic process The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0006401 RNA catabolic process The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps that includes poly(A) tail shortening and that can regulate mRNA stability.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0090304 nucleic acid metabolic process Any cellular metabolic process involving nucleic acids.
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0044248 cellular catabolic process The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
GO:1901575 organic substance catabolic process The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.
GO:0009056 catabolic process The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.
GO:0000956 nuclear-transcribed mRNA catabolic process The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells.
GO:0009057 macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0044265 cellular macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells.
GO:0046700 heterocycle catabolic process The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:1901361 organic cyclic compound catabolic process The chemical reactions and pathways resulting in the breakdown of organic cyclic compound.
GO:0034655 nucleobase-containing compound catabolic process The chemical reactions and pathways resulting in the breakdown of nucleobases, nucleosides, nucleotides and nucleic acids.

61 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0000956 GO:0000290
part of GO:0000288 GO:0000290
is_a GO:1901360 GO:0000290
is_a GO:1901361 GO:0000290
is_a GO:0009057 GO:0000290
is_a GO:0009056 GO:0000290
part of GO:0006139 GO:0000290
is_a GO:0034655 GO:0000290
is_a GO:0016070 GO:0000290
part of GO:0008152 GO:0000290
is_a GO:0016071 GO:0000290
part of GO:0090304 GO:0000290
part of GO:0008150 GO:0000290
part of GO:0071704 GO:0000290
part of GO:0034655 GO:0000290
is_a GO:0006139 GO:0000290
part of GO:0006807 GO:0000290
is_a GO:0008152 GO:0000290
part of GO:0044260 GO:0000290
is_a GO:0008150 GO:0000290
part of GO:0046483 GO:0000290
is_a GO:0090304 GO:0000290
is_a GO:0034641 GO:0000290
part of GO:0043170 GO:0000290
part of GO:0044265 GO:0000290
part of GO:0009057 GO:0000290
part of GO:0009056 GO:0000290
part of GO:1901361 GO:0000290
part of GO:1901360 GO:0000290
is_a GO:0006725 GO:0000290

2 Synonyms

Name Type
deadenylation-dependent decapping of nuclear mRNA synonym
deadenylylation-dependent decapping synonym