Protein Domain : IPR013017

Type:  Repeat Name:  NHL repeat, subgroup
Description:  The NHL repeat was defined by amino acid sequence homologies among Ncl-1, HT2A and Lin-41 proteins []. NHL is a conserved structural motif present in a large family of growth regulator. Many NHL containing proteins have additional domains such as a RING finger, a B-box zinc finger or a coiled-coil motif. According to structural model analysis the NHL domain could be involved in protein-protein interaction []. The NHL domain is a six-bladed beta-propeller, with the blades arrayed in a radial fashion around a central axis, and each blade composed of a highly twisted four stranded antiparallel beta-sheet []. The innermost strand of each blade is labeled 'a' and the outermost strand, 'd'. Like in other beta-propellers the sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue NHL repeat spans strands 'b-d' of one propellerblade and strand 'a' of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand a of the blade that harbors strands 'b-d' from the first sequence repeat. Short Name:  NHL_repeat_subgr

0 Child Features

0 Contains

1 Cross References

Identifier
PS51125

1 Found In

DB identifier Type Name
IPR011042 Domain Six-bladed beta-propeller, TolB-like

0 GO Annotation

0 Ontology Annotations

0 Parent Features

544 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_48.173 PAC:16420810 Carica papaya 562  
29883.m002038 B9S4L9 PAC:16812125 Ricinus communis 408  
30128.m008922 B9RFK4 PAC:16818508 Ricinus communis 1016  
28325.m000060 B9TAF6 PAC:16800633 Ricinus communis 634  
27812.m000040 B9TA48 PAC:16799282 Ricinus communis 435  
Cucsa.050780.1 A0A0A0LY80 PAC:16954115 Cucumis sativus 1082  
orange1.1g001380m A0A067GPJ8 PAC:18107656 Citrus sinensis 1089  
AT1G23890.2 F4I7N5 PAC:19655775 Arabidopsis thaliana 400  
AT1G23890.1 Q945M3 PAC:19655776 Arabidopsis thaliana 261  
Thhalv10012875m V4KU12 PAC:20203678 Eutrema salsugineum 676  
Thhalv10007807m V4K9P9 PAC:20187586 Eutrema salsugineum 399  
Ciclev10000268m V4T101 PAC:20786147 Citrus clementina 844  
Lus10020699 PAC:23140948 Linum usitatissimum 1062  
Lus10030850 PAC:23155254 Linum usitatissimum 609  
Lus10029176 PAC:23151873 Linum usitatissimum 540  
Lus10029840 PAC:23159803 Linum usitatissimum 1088  
Lus10012989 PAC:23149861 Linum usitatissimum 523  
Potri.016G092200.2 PAC:27011816 Populus trichocarpa 531  
Potri.016G092200.1 PAC:27011815 Populus trichocarpa 531  
Gorai.001G260900.2 A0A0D2NEE9 PAC:26822703 Gossypium raimondii 374  
Gorai.013G130100.1 A0A0D2VD50 PAC:26790367 Gossypium raimondii 1076  
65252 I0Z484 PAC:27389712 Coccomyxa subellipsoidea C-169 718  
16964 I0YU80 PAC:27392139 Coccomyxa subellipsoidea C-169 1021  
60313 C1MXW5 PAC:27338781 Micromonas pusilla CCMP1545 794  
55334 C1MKG9 PAC:27342688 Micromonas pusilla CCMP1545 490  
70293 C1EDR0 PAC:27404966 Micromonas sp RCC299 201  
55382 C1FEB2 PAC:27399189 Micromonas sp RCC299 131  
15206 A4RWP3 PAC:27415678 Ostreococcus lucimarinus 774  
Thecc1EG010276t2 A0A061E6Y5 PAC:27460702 Theobroma cacao 321  
Thecc1EG010276t1 A0A061E7R1 PAC:27460701 Theobroma cacao 404  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9868369
            14561773