Gene : Gorai.011G022200 G. raimondii v2.1
Defline:  (1 of 4) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  222
Name:  ? Gorai.011G022200 Secondary Identifier:  ? PAC:26807261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G022200 0.5kb upstream 0.5kb upstream 2074 true Chr11: 1562530-1564603 Gossypium raimondii
Gorai.011G022200 0.5kb upstream 0.5kb upstream 500 false Chr11: 1562530-1563029 Gossypium raimondii
Gorai.011G022200 0.5kb downstream 0.5kb downstream 2074 true Chr11: 1563030-1565103 Gossypium raimondii
Gorai.011G022200 0.5kb downstream 0.5kb downstream 500 false Chr11: 1564604-1565103 Gossypium raimondii
Gorai.011G022200 1.0kb upstream 1.0kb upstream 2574 true Chr11: 1562030-1564603 Gossypium raimondii
Gorai.011G022200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1562030-1563029 Gossypium raimondii
Gorai.011G022200 1.0kb downstream 1.0kb downstream 2574 true Chr11: 1563030-1565603 Gossypium raimondii
Gorai.011G022200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1564604-1565603 Gossypium raimondii
Gorai.011G022200 2.0kb upstream 2.0kb upstream 3574 true Chr11: 1561030-1564603 Gossypium raimondii
Gorai.011G022200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1561030-1563029 Gossypium raimondii
Gorai.011G022200 2.0kb downstream 2.0kb downstream 3574 true Chr11: 1563030-1566603 Gossypium raimondii
Gorai.011G022200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1564604-1566603 Gossypium raimondii
Gorai.011G022200 5.0kb upstream 5.0kb upstream 6574 true Chr11: 1558030-1564603 Gossypium raimondii
Gorai.011G022200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1558030-1563029 Gossypium raimondii
Gorai.011G022200 5.0kb downstream 5.0kb downstream 6574 true Chr11: 1563030-1569603 Gossypium raimondii
Gorai.011G022200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1564604-1569603 Gossypium raimondii
Gorai.011G022200 10.0kb upstream 10.0kb upstream 11574 true Chr11: 1553030-1564603 Gossypium raimondii
Gorai.011G022200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1553030-1563029 Gossypium raimondii
Gorai.011G022200 10.0kb downstream 10.0kb downstream 11574 true Chr11: 1563030-1574603 Gossypium raimondii
Gorai.011G022200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1564604-1574603 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785418 5273 Angiosperm View MSA
123812304 5264 Brassicales-Malvales Singleton cluster - no MSA
124308892 5266 SBM Singleton cluster - no MSA
124158609 5268 Malvidae Singleton cluster - no MSA
124042786 5270 Rosid View MSA
123757793 5271 Pentapetalae View MSA
122778808 5272 Eudicot View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain