Gene : Gorai.007G139500 G. raimondii v2.1
Defline:  (1 of 2) PTHR23083//PTHR23083:SF430 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  1395
Name:  ? Gorai.007G139500 Secondary Identifier:  ? PAC:26779422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G139500 0.5kb upstream 0.5kb upstream 4960 true Chr07: 11516310-11521269 Gossypium raimondii
Gorai.007G139500 0.5kb upstream 0.5kb upstream 500 false Chr07: 11516310-11516809 Gossypium raimondii
Gorai.007G139500 0.5kb downstream 0.5kb downstream 4960 true Chr07: 11516810-11521769 Gossypium raimondii
Gorai.007G139500 0.5kb downstream 0.5kb downstream 500 false Chr07: 11521270-11521769 Gossypium raimondii
Gorai.007G139500 1.0kb upstream 1.0kb upstream 5460 true Chr07: 11515810-11521269 Gossypium raimondii
Gorai.007G139500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11515810-11516809 Gossypium raimondii
Gorai.007G139500 1.0kb downstream 1.0kb downstream 5460 true Chr07: 11516810-11522269 Gossypium raimondii
Gorai.007G139500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11521270-11522269 Gossypium raimondii
Gorai.007G139500 2.0kb upstream 2.0kb upstream 6460 true Chr07: 11514810-11521269 Gossypium raimondii
Gorai.007G139500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11514810-11516809 Gossypium raimondii
Gorai.007G139500 2.0kb downstream 2.0kb downstream 6460 true Chr07: 11516810-11523269 Gossypium raimondii
Gorai.007G139500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11521270-11523269 Gossypium raimondii
Gorai.007G139500 5.0kb upstream 5.0kb upstream 9460 true Chr07: 11511810-11521269 Gossypium raimondii
Gorai.007G139500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11511810-11516809 Gossypium raimondii
Gorai.007G139500 5.0kb downstream 5.0kb downstream 9460 true Chr07: 11516810-11526269 Gossypium raimondii
Gorai.007G139500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11521270-11526269 Gossypium raimondii
Gorai.007G139500 10.0kb upstream 10.0kb upstream 14460 true Chr07: 11506810-11521269 Gossypium raimondii
Gorai.007G139500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11506810-11516809 Gossypium raimondii
Gorai.007G139500 10.0kb downstream 10.0kb downstream 14460 true Chr07: 11516810-11531269 Gossypium raimondii
Gorai.007G139500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11521270-11531269 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123808582 5264 Brassicales-Malvales Singleton cluster - no MSA
124305391 5266 SBM Singleton cluster - no MSA
124253364 5268 Malvidae View MSA
124067211 5270 Rosid View MSA
123736449 5271 Pentapetalae View MSA
122791589 5272 Eudicot View MSA
122042735 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain