Gene : Gorai.007G227800 G. raimondii v2.1
Defline:  (1 of 2) PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Genomic Order:  2278
Name:  ? Gorai.007G227800 Secondary Identifier:  ? PAC:26784153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G227800 0.5kb upstream 0.5kb upstream 7134 true Chr07: 27501816-27508949 Gossypium raimondii
Gorai.007G227800 0.5kb upstream 0.5kb upstream 500 false Chr07: 27508450-27508949 Gossypium raimondii
Gorai.007G227800 0.5kb downstream 0.5kb downstream 7134 true Chr07: 27501316-27508449 Gossypium raimondii
Gorai.007G227800 0.5kb downstream 0.5kb downstream 500 false Chr07: 27501316-27501815 Gossypium raimondii
Gorai.007G227800 1.0kb upstream 1.0kb upstream 7634 true Chr07: 27501816-27509449 Gossypium raimondii
Gorai.007G227800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27508450-27509449 Gossypium raimondii
Gorai.007G227800 1.0kb downstream 1.0kb downstream 7634 true Chr07: 27500816-27508449 Gossypium raimondii
Gorai.007G227800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27500816-27501815 Gossypium raimondii
Gorai.007G227800 2.0kb upstream 2.0kb upstream 8634 true Chr07: 27501816-27510449 Gossypium raimondii
Gorai.007G227800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27508450-27510449 Gossypium raimondii
Gorai.007G227800 2.0kb downstream 2.0kb downstream 8634 true Chr07: 27499816-27508449 Gossypium raimondii
Gorai.007G227800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27499816-27501815 Gossypium raimondii
Gorai.007G227800 5.0kb upstream 5.0kb upstream 11634 true Chr07: 27501816-27513449 Gossypium raimondii
Gorai.007G227800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27508450-27513449 Gossypium raimondii
Gorai.007G227800 5.0kb downstream 5.0kb downstream 11634 true Chr07: 27496816-27508449 Gossypium raimondii
Gorai.007G227800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27496816-27501815 Gossypium raimondii
Gorai.007G227800 10.0kb upstream 10.0kb upstream 16634 true Chr07: 27501816-27518449 Gossypium raimondii
Gorai.007G227800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27508450-27518449 Gossypium raimondii
Gorai.007G227800 10.0kb downstream 10.0kb downstream 16634 true Chr07: 27491816-27508449 Gossypium raimondii
Gorai.007G227800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27491816-27501815 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836498 5264 Brassicales-Malvales View MSA
124341256 5266 SBM View MSA
124238514 5268 Malvidae View MSA
124068788 5270 Rosid View MSA
123740792 5271 Pentapetalae View MSA
122790412 5272 Eudicot View MSA
122047030 5273 Angiosperm View MSA
121346070 5274 Embryophyte View MSA
123380319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain