Gene : Gorai.006G139500 G. raimondii v2.1
Defline:  (1 of 14) PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1395
Name:  ? Gorai.006G139500 Secondary Identifier:  ? PAC:26831481
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G139500 0.5kb upstream 0.5kb upstream 3542 true Chr06: 39653792-39657333 Gossypium raimondii
Gorai.006G139500 0.5kb upstream 0.5kb upstream 500 false Chr06: 39656834-39657333 Gossypium raimondii
Gorai.006G139500 0.5kb downstream 0.5kb downstream 3542 true Chr06: 39653292-39656833 Gossypium raimondii
Gorai.006G139500 0.5kb downstream 0.5kb downstream 500 false Chr06: 39653292-39653791 Gossypium raimondii
Gorai.006G139500 1.0kb upstream 1.0kb upstream 4042 true Chr06: 39653792-39657833 Gossypium raimondii
Gorai.006G139500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39656834-39657833 Gossypium raimondii
Gorai.006G139500 1.0kb downstream 1.0kb downstream 4042 true Chr06: 39652792-39656833 Gossypium raimondii
Gorai.006G139500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39652792-39653791 Gossypium raimondii
Gorai.006G139500 2.0kb upstream 2.0kb upstream 5042 true Chr06: 39653792-39658833 Gossypium raimondii
Gorai.006G139500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39656834-39658833 Gossypium raimondii
Gorai.006G139500 2.0kb downstream 2.0kb downstream 5042 true Chr06: 39651792-39656833 Gossypium raimondii
Gorai.006G139500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39651792-39653791 Gossypium raimondii
Gorai.006G139500 5.0kb upstream 5.0kb upstream 8042 true Chr06: 39653792-39661833 Gossypium raimondii
Gorai.006G139500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39656834-39661833 Gossypium raimondii
Gorai.006G139500 5.0kb downstream 5.0kb downstream 8042 true Chr06: 39648792-39656833 Gossypium raimondii
Gorai.006G139500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39648792-39653791 Gossypium raimondii
Gorai.006G139500 10.0kb upstream 10.0kb upstream 13042 true Chr06: 39653792-39666833 Gossypium raimondii
Gorai.006G139500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39656834-39666833 Gossypium raimondii
Gorai.006G139500 10.0kb downstream 10.0kb downstream 13042 true Chr06: 39643792-39656833 Gossypium raimondii
Gorai.006G139500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39643792-39653791 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
123827574 5264 Brassicales-Malvales View MSA
124342952 5266 SBM View MSA
124241472 5268 Malvidae View MSA
124074788 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain