Gene : Gorai.006G002200 G. raimondii v2.1
Defline:  (1 of 6) PTHR22835//PTHR22835:SF116 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  22
Name:  ? Gorai.006G002200 Secondary Identifier:  ? PAC:26831229
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LIPAS-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G002200 0.5kb upstream 0.5kb upstream 2886 true Chr06: 576725-579610 Gossypium raimondii
Gorai.006G002200 0.5kb upstream 0.5kb upstream 500 false Chr06: 579111-579610 Gossypium raimondii
Gorai.006G002200 0.5kb downstream 0.5kb downstream 2886 true Chr06: 576225-579110 Gossypium raimondii
Gorai.006G002200 0.5kb downstream 0.5kb downstream 500 false Chr06: 576225-576724 Gossypium raimondii
Gorai.006G002200 1.0kb upstream 1.0kb upstream 3386 true Chr06: 576725-580110 Gossypium raimondii
Gorai.006G002200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 579111-580110 Gossypium raimondii
Gorai.006G002200 1.0kb downstream 1.0kb downstream 3386 true Chr06: 575725-579110 Gossypium raimondii
Gorai.006G002200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 575725-576724 Gossypium raimondii
Gorai.006G002200 2.0kb upstream 2.0kb upstream 4386 true Chr06: 576725-581110 Gossypium raimondii
Gorai.006G002200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 579111-581110 Gossypium raimondii
Gorai.006G002200 2.0kb downstream 2.0kb downstream 4386 true Chr06: 574725-579110 Gossypium raimondii
Gorai.006G002200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 574725-576724 Gossypium raimondii
Gorai.006G002200 5.0kb upstream 5.0kb upstream 7386 true Chr06: 576725-584110 Gossypium raimondii
Gorai.006G002200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 579111-584110 Gossypium raimondii
Gorai.006G002200 5.0kb downstream 5.0kb downstream 7386 true Chr06: 571725-579110 Gossypium raimondii
Gorai.006G002200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 571725-576724 Gossypium raimondii
Gorai.006G002200 10.0kb upstream 10.0kb upstream 12386 true Chr06: 576725-589110 Gossypium raimondii
Gorai.006G002200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 579111-589110 Gossypium raimondii
Gorai.006G002200 10.0kb downstream 10.0kb downstream 12386 true Chr06: 566725-579110 Gossypium raimondii
Gorai.006G002200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 566725-576724 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825112 5264 Brassicales-Malvales View MSA
124320464 5266 SBM View MSA
124252926 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain