Gene : Gorai.009G173000 G. raimondii v2.1
Defline:  (1 of 4) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  1730
Name:  ? Gorai.009G173000 Secondary Identifier:  ? PAC:26764799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G173000 0.5kb upstream 0.5kb upstream 3454 true Chr09: 13336968-13340421 Gossypium raimondii
Gorai.009G173000 0.5kb upstream 0.5kb upstream 500 false Chr09: 13336968-13337467 Gossypium raimondii
Gorai.009G173000 0.5kb downstream 0.5kb downstream 3454 true Chr09: 13337468-13340921 Gossypium raimondii
Gorai.009G173000 0.5kb downstream 0.5kb downstream 500 false Chr09: 13340422-13340921 Gossypium raimondii
Gorai.009G173000 1.0kb upstream 1.0kb upstream 3954 true Chr09: 13336468-13340421 Gossypium raimondii
Gorai.009G173000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13336468-13337467 Gossypium raimondii
Gorai.009G173000 1.0kb downstream 1.0kb downstream 3954 true Chr09: 13337468-13341421 Gossypium raimondii
Gorai.009G173000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13340422-13341421 Gossypium raimondii
Gorai.009G173000 2.0kb upstream 2.0kb upstream 4954 true Chr09: 13335468-13340421 Gossypium raimondii
Gorai.009G173000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13335468-13337467 Gossypium raimondii
Gorai.009G173000 2.0kb downstream 2.0kb downstream 4954 true Chr09: 13337468-13342421 Gossypium raimondii
Gorai.009G173000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13340422-13342421 Gossypium raimondii
Gorai.009G173000 5.0kb upstream 5.0kb upstream 7954 true Chr09: 13332468-13340421 Gossypium raimondii
Gorai.009G173000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13332468-13337467 Gossypium raimondii
Gorai.009G173000 5.0kb downstream 5.0kb downstream 7954 true Chr09: 13337468-13345421 Gossypium raimondii
Gorai.009G173000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13340422-13345421 Gossypium raimondii
Gorai.009G173000 10.0kb upstream 10.0kb upstream 12954 true Chr09: 13327468-13340421 Gossypium raimondii
Gorai.009G173000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13327468-13337467 Gossypium raimondii
Gorai.009G173000 10.0kb downstream 10.0kb downstream 12954 true Chr09: 13337468-13350421 Gossypium raimondii
Gorai.009G173000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13340422-13350421 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121516093 5273 Angiosperm Singleton cluster - no MSA
123810637 5264 Brassicales-Malvales Singleton cluster - no MSA
124307327 5266 SBM Singleton cluster - no MSA
124157335 5268 Malvidae Singleton cluster - no MSA
123881849 5270 Rosid Singleton cluster - no MSA
123464806 5271 Pentapetalae Singleton cluster - no MSA
122500127 5272 Eudicot Singleton cluster - no MSA
120788985 5274 Embryophyte Singleton cluster - no MSA
122830688 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain