Gene : Gorai.013G246600 G. raimondii v2.1
Defline:  (1 of 1) 2.5.1.115 - Homogentisate phytyltransferase / HPT Genomic Order:  2466
Name:  ? Gorai.013G246600 Secondary Identifier:  ? PAC:26789130
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1422 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G246600 0.5kb upstream 0.5kb upstream 7137 true Chr13: 56536557-56543693 Gossypium raimondii
Gorai.013G246600 0.5kb upstream 0.5kb upstream 500 false Chr13: 56536557-56537056 Gossypium raimondii
Gorai.013G246600 0.5kb downstream 0.5kb downstream 7137 true Chr13: 56537057-56544193 Gossypium raimondii
Gorai.013G246600 0.5kb downstream 0.5kb downstream 500 false Chr13: 56543694-56544193 Gossypium raimondii
Gorai.013G246600 1.0kb upstream 1.0kb upstream 7637 true Chr13: 56536057-56543693 Gossypium raimondii
Gorai.013G246600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 56536057-56537056 Gossypium raimondii
Gorai.013G246600 1.0kb downstream 1.0kb downstream 7637 true Chr13: 56537057-56544693 Gossypium raimondii
Gorai.013G246600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 56543694-56544693 Gossypium raimondii
Gorai.013G246600 2.0kb upstream 2.0kb upstream 8637 true Chr13: 56535057-56543693 Gossypium raimondii
Gorai.013G246600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 56535057-56537056 Gossypium raimondii
Gorai.013G246600 2.0kb downstream 2.0kb downstream 8637 true Chr13: 56537057-56545693 Gossypium raimondii
Gorai.013G246600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 56543694-56545693 Gossypium raimondii
Gorai.013G246600 5.0kb upstream 5.0kb upstream 11637 true Chr13: 56532057-56543693 Gossypium raimondii
Gorai.013G246600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 56532057-56537056 Gossypium raimondii
Gorai.013G246600 5.0kb downstream 5.0kb downstream 11637 true Chr13: 56537057-56548693 Gossypium raimondii
Gorai.013G246600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 56543694-56548693 Gossypium raimondii
Gorai.013G246600 10.0kb upstream 10.0kb upstream 16637 true Chr13: 56527057-56543693 Gossypium raimondii
Gorai.013G246600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 56527057-56537056 Gossypium raimondii
Gorai.013G246600 10.0kb downstream 10.0kb downstream 16637 true Chr13: 56537057-56553693 Gossypium raimondii
Gorai.013G246600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 56543694-56553693 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829047 5264 Brassicales-Malvales View MSA
124346176 5266 SBM View MSA
124238838 5268 Malvidae View MSA
124061099 5270 Rosid View MSA
123745017 5271 Pentapetalae View MSA
122786578 5272 Eudicot View MSA
122051505 5273 Angiosperm View MSA
121349227 5274 Embryophyte View MSA
123426888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain