Gene : Gorai.013G172500 G. raimondii v2.1
Defline:  (1 of 3) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1725
Name:  ? Gorai.013G172500 Secondary Identifier:  ? PAC:26789601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G172500 0.5kb upstream 0.5kb upstream 3447 true Chr13: 45927015-45930461 Gossypium raimondii
Gorai.013G172500 0.5kb upstream 0.5kb upstream 500 false Chr13: 45927015-45927514 Gossypium raimondii
Gorai.013G172500 0.5kb downstream 0.5kb downstream 3447 true Chr13: 45927515-45930961 Gossypium raimondii
Gorai.013G172500 0.5kb downstream 0.5kb downstream 500 false Chr13: 45930462-45930961 Gossypium raimondii
Gorai.013G172500 1.0kb upstream 1.0kb upstream 3947 true Chr13: 45926515-45930461 Gossypium raimondii
Gorai.013G172500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45926515-45927514 Gossypium raimondii
Gorai.013G172500 1.0kb downstream 1.0kb downstream 3947 true Chr13: 45927515-45931461 Gossypium raimondii
Gorai.013G172500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45930462-45931461 Gossypium raimondii
Gorai.013G172500 2.0kb upstream 2.0kb upstream 4947 true Chr13: 45925515-45930461 Gossypium raimondii
Gorai.013G172500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45925515-45927514 Gossypium raimondii
Gorai.013G172500 2.0kb downstream 2.0kb downstream 4947 true Chr13: 45927515-45932461 Gossypium raimondii
Gorai.013G172500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45930462-45932461 Gossypium raimondii
Gorai.013G172500 5.0kb upstream 5.0kb upstream 7947 true Chr13: 45922515-45930461 Gossypium raimondii
Gorai.013G172500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45922515-45927514 Gossypium raimondii
Gorai.013G172500 5.0kb downstream 5.0kb downstream 7947 true Chr13: 45927515-45935461 Gossypium raimondii
Gorai.013G172500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45930462-45935461 Gossypium raimondii
Gorai.013G172500 10.0kb upstream 10.0kb upstream 12947 true Chr13: 45917515-45930461 Gossypium raimondii
Gorai.013G172500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45917515-45927514 Gossypium raimondii
Gorai.013G172500 10.0kb downstream 10.0kb downstream 12947 true Chr13: 45927515-45940461 Gossypium raimondii
Gorai.013G172500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45930462-45940461 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123814100 5264 Brassicales-Malvales Singleton cluster - no MSA
124310605 5266 SBM Singleton cluster - no MSA
124160035 5268 Malvidae Singleton cluster - no MSA
123884169 5270 Rosid Singleton cluster - no MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain