Gene : Gorai.013G238000 G. raimondii v2.1
Defline:  (1 of 1) PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Genomic Order:  2380
Name:  ? Gorai.013G238000 Secondary Identifier:  ? PAC:26787934
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G238000 0.5kb upstream 0.5kb upstream 6193 true Chr13: 55580659-55586851 Gossypium raimondii
Gorai.013G238000 0.5kb upstream 0.5kb upstream 500 false Chr13: 55586352-55586851 Gossypium raimondii
Gorai.013G238000 0.5kb downstream 0.5kb downstream 6193 true Chr13: 55580159-55586351 Gossypium raimondii
Gorai.013G238000 0.5kb downstream 0.5kb downstream 500 false Chr13: 55580159-55580658 Gossypium raimondii
Gorai.013G238000 1.0kb upstream 1.0kb upstream 6693 true Chr13: 55580659-55587351 Gossypium raimondii
Gorai.013G238000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 55586352-55587351 Gossypium raimondii
Gorai.013G238000 1.0kb downstream 1.0kb downstream 6693 true Chr13: 55579659-55586351 Gossypium raimondii
Gorai.013G238000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 55579659-55580658 Gossypium raimondii
Gorai.013G238000 2.0kb upstream 2.0kb upstream 7693 true Chr13: 55580659-55588351 Gossypium raimondii
Gorai.013G238000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 55586352-55588351 Gossypium raimondii
Gorai.013G238000 2.0kb downstream 2.0kb downstream 7693 true Chr13: 55578659-55586351 Gossypium raimondii
Gorai.013G238000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 55578659-55580658 Gossypium raimondii
Gorai.013G238000 5.0kb upstream 5.0kb upstream 10693 true Chr13: 55580659-55591351 Gossypium raimondii
Gorai.013G238000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 55586352-55591351 Gossypium raimondii
Gorai.013G238000 5.0kb downstream 5.0kb downstream 10693 true Chr13: 55575659-55586351 Gossypium raimondii
Gorai.013G238000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 55575659-55580658 Gossypium raimondii
Gorai.013G238000 10.0kb upstream 10.0kb upstream 15693 true Chr13: 55580659-55596351 Gossypium raimondii
Gorai.013G238000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 55586352-55596351 Gossypium raimondii
Gorai.013G238000 10.0kb downstream 10.0kb downstream 15693 true Chr13: 55570659-55586351 Gossypium raimondii
Gorai.013G238000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 55570659-55580658 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829618 5264 Brassicales-Malvales View MSA
124343160 5266 SBM View MSA
124241471 5268 Malvidae View MSA
124071418 5270 Rosid View MSA
123749462 5271 Pentapetalae View MSA
122791717 5272 Eudicot View MSA
122045456 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121347733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain