Gene : Gorai.003G032500 G. raimondii v2.1
Defline:  (1 of 11) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  325
Name:  ? Gorai.003G032500 Secondary Identifier:  ? PAC:26799776
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-2541 Gossypium raimondii pathologic  
Graimondii PWY-5670 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G032500 0.5kb upstream 0.5kb upstream 3779 true Chr03: 3146595-3150373 Gossypium raimondii
Gorai.003G032500 0.5kb upstream 0.5kb upstream 500 false Chr03: 3146595-3147094 Gossypium raimondii
Gorai.003G032500 0.5kb downstream 0.5kb downstream 3779 true Chr03: 3147095-3150873 Gossypium raimondii
Gorai.003G032500 0.5kb downstream 0.5kb downstream 500 false Chr03: 3150374-3150873 Gossypium raimondii
Gorai.003G032500 1.0kb upstream 1.0kb upstream 4279 true Chr03: 3146095-3150373 Gossypium raimondii
Gorai.003G032500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3146095-3147094 Gossypium raimondii
Gorai.003G032500 1.0kb downstream 1.0kb downstream 4279 true Chr03: 3147095-3151373 Gossypium raimondii
Gorai.003G032500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3150374-3151373 Gossypium raimondii
Gorai.003G032500 2.0kb upstream 2.0kb upstream 5279 true Chr03: 3145095-3150373 Gossypium raimondii
Gorai.003G032500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3145095-3147094 Gossypium raimondii
Gorai.003G032500 2.0kb downstream 2.0kb downstream 5279 true Chr03: 3147095-3152373 Gossypium raimondii
Gorai.003G032500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3150374-3152373 Gossypium raimondii
Gorai.003G032500 5.0kb upstream 5.0kb upstream 8279 true Chr03: 3142095-3150373 Gossypium raimondii
Gorai.003G032500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3142095-3147094 Gossypium raimondii
Gorai.003G032500 5.0kb downstream 5.0kb downstream 8279 true Chr03: 3147095-3155373 Gossypium raimondii
Gorai.003G032500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3150374-3155373 Gossypium raimondii
Gorai.003G032500 10.0kb upstream 10.0kb upstream 13279 true Chr03: 3137095-3150373 Gossypium raimondii
Gorai.003G032500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3137095-3147094 Gossypium raimondii
Gorai.003G032500 10.0kb downstream 10.0kb downstream 13279 true Chr03: 3147095-3160373 Gossypium raimondii
Gorai.003G032500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3150374-3160373 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain