Gene : Gorai.001G250200 G. raimondii v2.1
Defline:  (1 of 2) PTHR26312:SF76 - TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  2502
Name:  ? Gorai.001G250200 Secondary Identifier:  ? PAC:26820738
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G250200 0.5kb upstream 0.5kb upstream 2336 true Chr01: 51676500-51678835 Gossypium raimondii
Gorai.001G250200 0.5kb upstream 0.5kb upstream 500 false Chr01: 51676500-51676999 Gossypium raimondii
Gorai.001G250200 0.5kb downstream 0.5kb downstream 2336 true Chr01: 51677000-51679335 Gossypium raimondii
Gorai.001G250200 0.5kb downstream 0.5kb downstream 500 false Chr01: 51678836-51679335 Gossypium raimondii
Gorai.001G250200 1.0kb upstream 1.0kb upstream 2836 true Chr01: 51676000-51678835 Gossypium raimondii
Gorai.001G250200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51676000-51676999 Gossypium raimondii
Gorai.001G250200 1.0kb downstream 1.0kb downstream 2836 true Chr01: 51677000-51679835 Gossypium raimondii
Gorai.001G250200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51678836-51679835 Gossypium raimondii
Gorai.001G250200 2.0kb upstream 2.0kb upstream 3836 true Chr01: 51675000-51678835 Gossypium raimondii
Gorai.001G250200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51675000-51676999 Gossypium raimondii
Gorai.001G250200 2.0kb downstream 2.0kb downstream 3836 true Chr01: 51677000-51680835 Gossypium raimondii
Gorai.001G250200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51678836-51680835 Gossypium raimondii
Gorai.001G250200 5.0kb upstream 5.0kb upstream 6836 true Chr01: 51672000-51678835 Gossypium raimondii
Gorai.001G250200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51672000-51676999 Gossypium raimondii
Gorai.001G250200 5.0kb downstream 5.0kb downstream 6836 true Chr01: 51677000-51683835 Gossypium raimondii
Gorai.001G250200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51678836-51683835 Gossypium raimondii
Gorai.001G250200 10.0kb upstream 10.0kb upstream 11836 true Chr01: 51667000-51678835 Gossypium raimondii
Gorai.001G250200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51667000-51676999 Gossypium raimondii
Gorai.001G250200 10.0kb downstream 10.0kb downstream 11836 true Chr01: 51677000-51688835 Gossypium raimondii
Gorai.001G250200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51678836-51688835 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840752 5264 Brassicales-Malvales View MSA
124338803 5266 SBM View MSA
124237294 5268 Malvidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain